Roseburia intestinalis M50/1: ROI_19770
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Entry
ROI_19770 CDS
T02598
Name
(GenBank) tripartite ATP-independent periplasmic transporter solute receptor, DctP family
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ROI_19770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_19770
Transporters [BR:
rim02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ROI_19770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
PH_2
Motif
Other DBs
NCBI-ProteinID:
CBL09023
LinkDB
All DBs
Position
1988187..1989194
Genome browser
AA seq
335 aa
AA seq
DB search
MKKRRILILFAAVVLSAGFFLYHRLRSVRAPEFVLSYAENQTEDYPTTLGAKKFAELVER
ESSGRIKILVQAEGELGAESGVIAQMQYGGIDFARVSLSQLAEYIPELNVLQMPYLYSDS
DHMWKVLDGRIGSDFLEKVSKSELIGLSWYDAGARNFYNSKKPITCLEDMAGMRIRVQES
EVMVDMVEALGATALPIPYADVYSALERGTVDGAENNWPSYEAMNHYEVAKYYTVDEHNR
VPEMQICSKHTWNKFSEDDRQMILECAKESALYERKLWKEREADSKEIALKQGVEVVELS
AAEKKRFQEAVRGVYEKYCADYMDVIEQIIEENNE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagacgaatcttgattttgtttgcggcagtggttttgagcgctggatttttt
ctgtatcacaggctgcgcagcgtgagagctcccgaatttgtcctgtcctatgcggagaac
cagacggaggattatccgacaacacttggggcaaaaaagtttgccgagctggtggagagg
gagagcagcggaagaataaagattttagttcaggcagagggggaacttggtgcagagagc
ggtgtgatcgcacagatgcagtatggaggcattgattttgcaagggtttccctgtcgcag
ttagcagagtacataccggaattaaacgttttgcagatgccatatctgtattctgattcg
gatcatatgtggaaagtgttagatggcaggatcggtagtgactttttggagaaagtgagt
aaaagcgaactgattggcctttcctggtatgatgcgggagcaagaaatttttataattct
aaaaagccgatcacctgtcttgaggatatggcaggtatgcgtatccgtgtgcaggaatcg
gaggtgatggtcgatatggtggaggcacttggcgcgacggcactgccgattccctatgcg
gatgtttattccgcattagagcgcggaacggtggacggggcggagaataactggccttct
tatgaagcgatgaatcattatgaggtggcgaaatattatacagttgatgaacacaaccgg
gtaccggagatgcagatctgttcgaaacatacatggaacaagttttcggaagatgaccgt
cagatgatcttagagtgcgcaaaagaatctgcgctgtatgagagaaagttgtggaaagaa
cgtgaggcggattctaaggagatcgctttgaaacagggtgtggaagtggtagaactttct
gcggcagaaaaaaagcgttttcaggaggcggtcaggggcgtgtatgaaaagtattgcgcg
gactacatggacgtgatcgaacagattatcgaagaaaataatgagtga
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