Roseburia intestinalis M50/1: ROI_20720
Help
Entry
ROI_20720 CDS
T02598
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_20720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_20720
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
ROI_20720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
CARD_2
Motif
Other DBs
NCBI-ProteinID:
CBL09100
UniProt:
D4KQE8
LinkDB
All DBs
Position
2087584..2088900
Genome browser
AA seq
438 aa
AA seq
DB search
MNKRIVAGMLFTTVVCMMLGGCGFTADKENVKNSGAVESVMPGAEVSTEMTERDAEADNG
VVQLKVWSEEDNFDMLNQMIDSFEQKYAGQAKFEITLEQNADSDTKDILLGDIHNGADVF
PFADDQLSAMVAAGALYPVPNAEEVKSANLEESVSAASINDILYAYPMTADNGYFLYYDK
NVLSDEDVQTMDGMLEALNAAGRSFSMELNSGWYLYTFFGNTGLEFGINDDGVTNYCNWN
ATDGAIKGVDVAQAILNITTNPAFISQPDGDFITGVQNGTVSAGISGVWNAVSVREAWGD
NYGAVKLPTYTVAGQQVQMSSFTGYKMMGVNAYSKYPEWAAKLADWLTNEENQTIRFEER
NQGPSNTNAAASDAVKQVPAIQAVIAQSEFGKLQRVGNSYWDACTAFGDTMAAGNPSGQD
LQEIMDTLVDGIAASAAK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagaattgttgcaggtatgctgtttacgacagttgtatgtatgatgttagga
ggctgcggcttcacagctgataaagaaaatgtaaagaatagtggtgctgtggaatcggta
atgccgggagcagaagtatctacggagatgacagaaagagatgctgaggcggataatggt
gtggtacagcttaaagtatggtcggaagaagacaacttcgacatgttaaaccagatgata
gacagctttgaacagaaatatgcaggacaggcaaagtttgagattacattggaacaaaat
gctgattctgatacaaaggatattcttttgggagatattcataacggggcggatgttttc
ccgtttgcggatgatcagctttctgcaatggttgccgctggtgcattatatccggtgcca
aatgcagaagaagtaaagagtgcgaatttagaagagtcggtttctgctgcatctattaat
gatatcttatatgcttatccaatgacggcagataacggatacttcctctattatgataaa
aatgttctttccgatgaagatgtccagacgatggatggcatgttagaggcactgaatgct
gcaggcagatcattttccatggagcttaattcgggctggtatctgtatacattttttggt
aatacgggtctggagtttggtattaatgatgatggcgtgacaaattactgtaactggaac
gccacagatggagcaattaaaggcgttgatgtggcacaggccattttaaatatcacaacc
aatccggcatttatcagccagccggatggagatttcattacaggagtacagaatggtacg
gttagtgcgggaatcagtggcgtatggaatgcagtttcagtcagggaagcatggggcgat
aattacggagccgtaaaacttccaacttacacggtggcagggcagcaggtacagatgtct
tcttttaccggttataaaatgatgggcgtgaatgcatattccaaatatccggaatgggca
gcaaaacttgcagactggcttacaaatgaagaaaaccagacgatccgttttgaagagaga
aatcagggaccttcgaatacgaatgcagcggcttcggatgcggtgaaacaggtgccggca
attcaggctgttattgcacaatcagaatttggtaaactgcagcgcgttggaaacagttac
tgggatgcatgtactgcatttggtgatacgatggcagccggtaacccatccggtcaggat
ctgcaggaaattatggatacgcttgttgacgggatagcagcatccgcagcaaaataa
DBGET
integrated database retrieval system
