Roseburia intestinalis M50/1: ROI_20840
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Entry
ROI_20840 CDS
T02598
Name
(GenBank) Pleiotropic transcriptional repressor
KO
K03706
transcriptional pleiotropic repressor
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rim03000
]
ROI_20840
Transcription factors [BR:
rim03000
]
Prokaryotic type
Helix-turn-helix
Other families
ROI_20840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CodY
HTH_CodY
HTH_Crp_2
TrmB
MarR_2
HTH_11
MarR
Ribosomal_S25
Rrf2
HTH_24
GntR
HisK_sensor
HTH_29
HTH_41
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CBL09110
LinkDB
All DBs
Position
2104210..2104995
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AA seq
261 aa
AA seq
DB search
MSVQLLDKTRKINKLLHNNNSSKVVFNDICDVLKEILESNILVISKKGKVLGTGVLQGVE
EINELIVDEVGGFIDPLLNERLLGILSTKENVNLETLGFVDDVKKYTAIITPIDIAGERL
GTLFVYRENRQYDIDDIILSEYGTTVVGLEMMRSVNEENAEETRKVQIVKSAISTLSFSE
LEAITHIFDEMDGKEGILVASKIADRVGITRSVIVNALRKFESAGVIESRSSGMKGTYIK
VLNDVVFDELDKIKKENHKNS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcagttgttagataaaacaagaaaaatcaataaattgcttcacaataataat
tcttccaaagtggtatttaatgatatatgtgatgtattaaaagaaatactggaatcaaat
attctggtcatcagtaaaaaaggaaaagtacttggaacaggagtacttcagggtgtggaa
gagatcaatgaattgattgtggacgaggtaggaggttttatcgacccgcttttaaatgaa
cgtttgcttggaatcctgtccacaaaagaaaatgtgaatcttgaaacacttggatttgtg
gatgatgtaaaaaaatatacagcaatcatcacaccgattgatattgcgggagaacgactg
ggaacattatttgtatatcgcgagaaccgtcaatatgatatagatgacattatactgagt
gaatatggaacaacggtggtcggacttgaaatgatgcgttctgtaaatgaagaaaatgca
gaagagacaagaaaagtacagattgtaaaatctgcgatcagtacattgtctttttcagaa
ttagaggcaatcacacatatttttgatgagatggatggcaaggaagggatccttgttgcg
agcaagattgcagaccgtgttgggattacaagatctgtaatcgtaaatgcactacggaaa
tttgaaagtgcaggtgtgatcgaatcaagatcttcgggaatgaaaggaacatacatcaaa
gtattaaatgatgttgtgtttgatgaactggacaaaataaagaaagagaatcataagaat
agttaa
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