Roseburia intestinalis M50/1: ROI_20890
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Entry
ROI_20890 CDS
T02598
Name
(GenBank) flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
KO
K02409
flagellar M-ring protein FliF
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ROI_20890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rim02044
]
ROI_20890
02035 Bacterial motility proteins [BR:
rim02035
]
ROI_20890
Secretion system [BR:
rim02044
]
Type III secretion system
Flagellar export apparatus
ROI_20890
Bacterial motility proteins [BR:
rim02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
ROI_20890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
CBL09114
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Position
2106676..2108274
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AA seq
532 aa
AA seq
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MPEQVQNILNKITEWWKKFNTKQKALLISIVAVIIVALAILAAVVSKPNMVTLHECQTTA
EAGTVKDLLDGESISYQMSQDGLIFYVDAKDEAAASILLGKNDIPSQGASIDNVFDGGFS
STEADKTKKYKVYLQKYFAEQLETLSNVESASVTLDIPNDDGTILAKDQDSYAAVILTLN
GDMDEDQAAGLAKYIATQLGNKNTDNIQILDSNSNVLFSGDSSDTNVGTANSQLSVKSKA
ENLVKSKVKDVMVGSSLFDHVEVAPELVMDFDTSEEATHEYYAPDGQTNGMVGSKSEYES
ESEGGAAATPGTDSNDDTSYVIEDNNYTHSTVTDTTTNYQNNEKVTKKSSNGGTVNYADS
SVSLVATKYRIYDEDTLRASGALDNMTFDEYVAANSDPTPITVDQEYITMISNATGIPTD
KITIIAQEEPVFQYSSGGRSASDYLQIVLVVLILLLLGYVVFRSTRKEKVAEIEPELSVE
SLLESTKESQEEMQDIGYNEKSETRILIEKFVEDNPEAAASLLRNWLNEEWE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacaggtgcaaaatatattaaataagattacagaatggtggaaaaagtttaat
acaaagcagaaagcgttattgatcagcattgtcgcagtgatcattgttgcgctggcaata
ctggcagcggttgtcagtaaacccaatatggttacactgcacgagtgtcagacaacagca
gaggcaggtacagtgaaggatcttctggatggcgagagcatttcttatcagatgtctcag
gatggactgatcttttatgtagatgcaaaagatgaggcggctgcttcgattctgctcgga
aaaaatgatataccgagtcagggcgcatccattgataatgtttttgatggtggattcagt
tcgacagaggcagacaagacaaagaaatacaaagtttatctgcagaaatattttgctgaa
cagttggaaaccctgtcaaatgttgaaagtgcttctgtaacactcgatattccaaatgat
gatggaacaattcttgcaaaagatcaggattcctatgcagcagtgattcttactttaaac
ggagatatggatgaggatcaggcagcaggtcttgcaaaatacatagcaacacagcttgga
aataaaaatacagataatattcagattttagattctaattcgaatgtcttattctctgga
gactcttctgataccaatgtgggaactgcaaacagccagctctctgtaaaatcaaaagca
gaaaacctggtaaagagtaaagtgaaagatgttatggtgggttcttctttgtttgaccat
gtggaagtggcaccggaacttgtgatggatttcgatacgtcagaagaagcaacgcatgaa
tattatgcaccggacggacagacgaatggtatggttggcagtaagagtgaatacgaatca
gaatcagaaggtggtgcagctgcaacacctggaacagattcgaatgatgatacgtcttat
gtgattgaagataacaattacacacacagtactgttacagatacaaccacaaactaccag
aacaatgaaaaggtaacgaaaaagtcatcaaatggcggaactgttaattatgcagactct
tccgtttctctggtagcaacgaaataccgcatttacgatgaagatacattgcgtgcatcc
ggagcactcgataacatgacatttgatgagtatgttgcagcaaacagtgatccgacaccg
attacggttgatcaggaatatatcacgatgatttcaaatgcaacaggaatcccaacagac
aagattaccatcattgcacaggaagaaccggttttccagtattcttccggtggaagaagt
gcttctgattatttgcagatcgtacttgtagtattgatccttcttcttttaggctatgtg
gtgttccgcagtaccagaaaagagaaagtggcagagatcgaaccggagctttctgttgaa
agcctgcttgagtcaacaaaagaaagccaggaagaaatgcaggatattggatataatgag
aagtctgagacacgtatcctgattgaaaaatttgtggaagacaatccagaagcggcagca
tcattattgcgcaactggctgaacgaggagtgggaataa
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