Roseburia intestinalis M50/1: ROI_23580
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Entry
ROI_23580 CDS
T02598
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ROI_23580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rim03021
]
ROI_23580
03400 DNA repair and recombination proteins [BR:
rim03400
]
ROI_23580
Enzymes [BR:
rim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ROI_23580
Transcription machinery [BR:
rim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ROI_23580
DNA repair and recombination proteins [BR:
rim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ROI_23580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CBL09338
LinkDB
All DBs
Position
complement(2369456..2369725)
Genome browser
AA seq
89 aa
AA seq
DB search
MRKERGIIMIHPSYVELMKVVNDGVEIGEEPVVNSRYSIVIAAAKRARQIIAGDEPMAEK
KVCPKPLSIAVEELYEGKVKILPETSDEE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagaaaggggaattatcatgatacatccatcttatgtagaattaatgaaagta
gtaaacgacggtgtggaaattggtgaggagccggttgtaaacagccgttattccattgtg
attgcagctgcaaaaagagcacgccagatcattgcaggagatgagccgatggcagagaaa
aaagtgtgcccgaaaccattatccatcgcagtagaagaactttacgaaggaaaggtaaag
attttaccggagacatcggatgaagaataa
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