Roseburia intestinalis M50/1: ROI_24310
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Entry
ROI_24310 CDS
T02598
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
KO
K10188
lactose/L-arabinose transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_24310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_24310
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Lactose/L-arabinose transporter
ROI_24310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Asp_protease_2
BT_3044-like_C
Motif
Other DBs
NCBI-ProteinID:
CBL09397
LinkDB
All DBs
Position
complement(2443519..2444877)
Genome browser
AA seq
452 aa
AA seq
DB search
MKKKALGFMLAATMTVSVLAGCGGNQNEGNTNEKENVTNSNEDTQSVSAETNENGDETLT
VWCWDPTFNIYAMEQAEKIYQKDHPDFKLDIQENIYNDIETKLITAATSGDYSTLPDIFL
MQDYSFHKNIANFPGIFTELTDSGIDFSQFTEGKLADSTAEGKNYGLPFDNGATIMAIRS
DMVEAAGLTVDDFKDTTWSQFEELAKKVVEANGVPMIASSGGSELLMEMLQSAGASPIVD
GKVHIADNEALKKTMEVYKKLVDEGIIAEYTDWDQYIASMNDGKTAGVINGCWIMSSIQA
AEDQSGKWAIVNMPKLDGVDGATNYANCGGASWAVSSNCKNTELAFDFLKSTFGSSVELY
DDLLPNAGAIASYIPAAQSDVYNQASDFYGGQAVYKDIVGYAGSVPAFDCGAYYSDIRSA
LTDAITNVVQNNADIDGEMNNAQETLEFNIEN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaagcattgggattcatgttggcagcaactatgacagtatctgtgcttgcc
ggatgtggtgggaaccaaaatgaaggaaacacgaacgaaaaagaaaatgttacgaacagt
aatgaggatacgcagagtgtttccgcagaaacaaatgaaaatggagatgaaacacttacg
gtatggtgctgggatcccacttttaatatttatgccatggaacaggcagaaaagatttat
cagaaagaccatccagattttaaactggatattcaggaaaatatttataatgatattgag
acaaagctgattacagctgcaacgtcaggagattacagtactttaccggatatttttctg
atgcaggattattcattccataaaaatattgccaattttcctggaatttttacagaatta
acagattccggaattgatttttcacagtttacagagggaaaacttgcagattccacggca
gagggaaaaaattatggacttccttttgataatggtgcaacgattatggcaattcgttcg
gatatggtagaggcggcaggtcttacagttgacgattttaaggatactacatggtcacag
tttgaggaacttgcaaaaaaagtagtagaggcgaatggagtgccaatgatcgcttcctcc
gggggatccgaattacttatggaaatgctgcagtcggcaggagcctcaccaattgttgac
ggaaaggttcatattgcagacaatgaagcgttaaaaaagacaatggaagtttataaaaaa
ttagttgatgagggtattattgccgagtatacggactgggatcagtatattgcctctatg
aatgacggaaaaacagcaggagtgatcaatggatgctggatcatgtcatccattcaggcg
gcagaggatcagtcaggaaaatgggcaattgtaaacatgccaaaactggatggagttgat
ggagccacaaattatgcaaattgtggtggtgcaagctgggcagtatcttctaactgtaag
aatacagaacttgcatttgatttcttaaaatctacatttggaagcagtgtggaattatat
gatgatctgttgccgaatgcaggtgcgattgcaagctacattccggctgcacagtctgat
gtatataatcaggcatcagatttttatggtggacaggcagtatataaagatatcgttgga
tatgcaggttcggttccagcatttgactgtggtgcatactattcggacataagaagtgca
ttgacagatgcaatcacaaatgttgttcagaataatgctgatattgacggtgaaatgaat
aatgcacaggaaacattagaatttaatattgaaaattaa
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