Roseburia intestinalis M50/1: ROI_25240
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Entry
ROI_25240 CDS
T02598
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_25240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_25240
Transporters [BR:
rim02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ROI_25240
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_23
DUF87
MMR_HSR1
DUF7709
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBL09485
LinkDB
All DBs
Position
complement(2545347..2547668)
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AA seq
773 aa
AA seq
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MSKIFKNMLPYWKGLIIVVALLVVQAWCDLSLPAYTSDIIDVGIQNKGVEHVLPEAVTED
EFTLAQLFMADEEKESWENSYEKDGDVYRLTVTDKKQLDELDDTLLLPLLMNYQMSSVDE
QTFKESVAKQTGMDQAMLDNMSIEQIGESMGVPLTSFEKEVEDDDGNTVVTNCVDMRTIF
AAMEASGAMTEEQILSMRDTVSDTIDTMGSSLVKSMGIAYAVSCDTAAGVDIDKVQTSYL
WSAGGRMVAMALLMGVVTVLVGFFGARIGAGIGRDLRGKIFGQVVRFSNAEMDHFSTASL
ITRSTNDIQQIQMVSAVMIRMVAYAPILGIGGVLKIIQTGAGMGWIIILAILVILGYVMV
LMSVTMPRFKLMQKLVDKINLVSREILTGLSVIRAFGRETEEEKRFDAANKDLTKTMLFT
NRVMTFMMPGMMLIMNLLTVGIVWVGAHKIDAGSMQVGSMTAFITYAMMIVMAFLMLTAM
SIMLPRAAVAAERIDEVIRTESSIEDAKNPEELREHKGVIRFSHVSFRYPGAEADVLEDI
DFTAEPGKTTAIIGSTGCGKSTLVNLIPRLYDVTGGSVTLDGQDIRNIRMEDLREEIGFV
PQKGVLFSGTIASNLRFGKRDATDEQIKEAAAIAQAADFIEEKQEKYDSDIAQGGSNVSG
GQKQRLAIARAIAKQPKIYVFDDSFSALDLKTDAALRKALASKVKDSTVIIVAQRISTIL
HAEQILVLDDGKIVGKGTHEELLKNCETYQQIARSQLSAKELGIEESEVSVNE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatatttaaaaatatgctcccgtactggaagggactgatcattgttgttgca
ctgttagttgtacaggcgtggtgtgatctgtctcttccggcatacacatcggatattatt
gatgtcggaatccagaacaaaggtgtggagcatgtgctgccggaggcagtaacggaggat
gagtttacactggcacagctttttatggccgatgaggagaaggaaagctgggaaaacagt
tacgaaaaggacggagatgtttaccgtctgaccgttacagataaaaaacagttagatgaa
ctggatgatacgctgcttcttcctcttctgatgaactatcagatgtcatcggtggatgag
cagacatttaaagagagtgtggcaaaacagaccggaatggatcaggcgatgcttgataac
atgagtatcgagcagatcggggagtccatgggagtgccgcttacatcttttgagaaagaa
gtcgaggatgacgacggaaataccgtggttacgaattgcgtggatatgcgtacaattttt
gccgccatggaagcgtcaggggcaatgacagaggaacagatcttatccatgcgtgatacc
gtttctgatacgatcgataccatgggaagttctctggtaaaatcaatgggtatcgcgtat
gcagtaagctgtgatacagcggcaggagtggatattgataaggtacagacatcctatctc
tggtcagccggtggcaggatggttgcgatggcacttcttatgggtgtggtaacggttctg
gtaggattttttggtgcacgtatcggtgccggaatcggacgtgacctgcgaggaaagata
tttggacaggtggttcgtttttctaacgcggagatggatcatttttccactgcatcttta
attaccagaagtacgaatgatatccagcagattcagatggtatctgcagtgatgatccgt
atggttgcctatgcgccgattcttggcatcggaggtgtattaaaaatcatccagacagga
gcaggaatgggatggatcattattctggcaatccttgtgatccttggctatgtcatggta
ttgatgtctgttacaatgcctcgttttaagctgatgcagaaactggtcgataagatcaat
ctggtatccagagagatcttaacaggactttccgtcattcgtgcattcggcagggaaaca
gaggaagaaaaacgttttgatgctgcaaataaagatctgacaaagaccatgctgtttaca
aaccgtgtcatgacatttatgatgccgggtatgatgctgattatgaatcttctgaccgta
ggtatcgtatgggtaggcgcgcacaaaatcgatgccggttccatgcaggtcggttccatg
actgcattcatcacctatgcgatgatgatcgttatggcatttttaatgctgacagcaatg
tcgatcatgcttccgcgtgcagcagtagcagcagaacgtatcgatgaggttatccgcaca
gagtcttccatagaagatgcaaaaaatccggaagaattaagagaacacaaaggtgtgatc
cgtttttcacatgtcagcttccgctatccgggagcggaggcagatgtgttggaggatatt
gattttacagcggagccgggtaagacaacggcaatcatcggaagtaccggatgtggaaaa
tccacgctggtcaacctgattccaagactttatgatgtcacaggcggaagtgttacctta
gacggtcaggatatccggaatatccgtatggaagatttgagggaagaaatcggttttgtg
ccgcagaaaggtgtactgttttccggtacgatcgcgtcaaacctgcgttttggaaaacga
gacgccacagatgagcagatcaaagaggcggcagcaatcgcacaggcagccgattttatt
gaggagaaacaggaaaaatacgacagcgatattgcacagggcggaagcaacgtttccggt
ggacagaaacagcgtcttgccattgcacgtgcgattgcaaaacagccgaaaatctatgtg
tttgatgacagtttctctgcacttgacttaaagacggatgcggcacttcgaaaagcactg
gcatcgaaagtaaaagacagcacagtcatcattgtagcgcagagaattagtacaatttta
cacgcagaacagatccttgtgcttgatgatggaaagatcgtcggaaaaggtacgcatgaa
gaattgctgaaaaactgtgagacataccagcagatcgcacgttcacagctttcggcaaaa
gaacttggcatagaggaaagtgaggtgtctgtcaatgagtaa
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