Roseburia intestinalis M50/1: ROI_25930
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Entry
ROI_25930 CDS
T02598
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00300
Lysine biosynthesis
rim00470
D-Amino acid metabolism
rim01100
Metabolic pathways
rim01110
Biosynthesis of secondary metabolites
rim01120
Microbial metabolism in diverse environments
rim01230
Biosynthesis of amino acids
Module
rim_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROI_25930
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROI_25930
Enzymes [BR:
rim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ROI_25930
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Chordopox_E11
Motif
Other DBs
NCBI-ProteinID:
CBL09546
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Position
complement(2612902..2613747)
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AA seq
281 aa
AA seq
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MSEIILRKYHGVGNDYLIFDPKKNDVVLNERLIRQLCRRNIGVGADGILYGPVMEDKKIK
VRIFNPDGSEAEKSGNGIRIFSRYLKDAGYVKERQYYLTTKAGETLVTFLDDAGSCMRVD
MGYAVFEAEQIPALGFEGEVVGESIFFCDNFYNATCVSMGNPNCVIMLERVDREKALHLG
PYVENAKYFPNRINMQLCQIVDEKNIQVEIYERGAGYTFASGTGACAAAAASHRLGLVED
AVTVHMHGGDLFIEFEKDGRIFMTGSVVYIGKITVAEQFFA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatcatacttcgcaaataccatggagttggcaatgattatctgatctttgat
ccgaagaaaaatgatgtagttttaaatgagagattgataaggcagctttgtagacgcaat
attggtgtcggtgcagatggaattttgtacggaccggttatggaagataaaaaaattaaa
gtacgaatttttaatccggatggaagtgaagctgaaaaaagcggcaatggcatccggatt
ttttcaagatatttaaaagatgccggatatgtaaaagaaaggcaatattatctgaccacg
aaagcgggggaaacactggtaacatttttggatgatgctggaagctgtatgcgtgtggat
atgggatatgcggtctttgaggcagaacagatcccggcacttggatttgagggagaagtt
gtgggagaatcgatatttttctgcgacaatttttataatgcgacctgtgtatccatggga
aatccaaattgtgttattatgcttgagagggtagatcgtgagaaagcactgcatttaggg
ccatatgtggaaaatgcaaaatattttccaaaccgtatcaatatgcagctttgtcagatc
gtagatgaaaaaaatatacaggttgaaatttatgaacgcggggcggggtatacatttgct
tccggcaccggagcctgtgcggcagcagcggcttctcaccgtctgggattagtcgaagat
gcagtgaccgtacatatgcacggtggagatctttttatcgaatttgaaaaggatggaaga
attttcatgacaggatcggtcgtatatataggaaagattactgtggcagaacagtttttt
gcctga
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