Roseburia intestinalis M50/1: ROI_26730
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Entry
ROI_26730 CDS
T02598
Name
(GenBank) Transcriptional regulators
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rim03000
]
ROI_26730
Transcription factors [BR:
rim03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ROI_26730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_AraC
HTH_38
HTH_31
HTH_3
HTH_7
HTH_IclR
HTH_23
MarR_2
HTH_28
HTH_24
TnsD
Trp_repressor
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CBL09616
LinkDB
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Position
complement(2688050..2689060)
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AA seq
336 aa
AA seq
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MVTIKDIARESGYSVSTVSRVLNHRNDVSPDAKKKIEKVVAAYNFVPNNNAKHLKQSNSK
SIGVLVKGIQNMLFASIVEEIQCMIENTDYTLIVSYLDEDADEVEQAVLLCRERKPLGLL
FLGGNPEYFKKEFAQVDVPCVLVTNLADQMDFPNLSSVATDDIAAAKCAVDALFDAGHTK
IGILGGDIEKSYTSHQRFIGCQQSFLEHDTVFVPEKSYEKARFSYDSAYRGMKRLIARCP
DITAVFAMSDVMAIGAIRALRDLEYRVPEDVSVIGFDGTALAEYYNPKLATIKQQYQTLA
TRSVEILFGQIELKRSQIHEIVPFELASGESIQKIR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggttacgataaaagacatagccagggaatcaggatattccgtcagtaccgtgtcacgt
gtgctgaatcacagaaatgatgtcagtccggatgcaaaaaagaaaatcgaaaaagtagtc
gcagcgtataattttgtgccaaacaataatgcgaaacatctaaaacagagtaattccaaa
tccattggtgtgctggtaaaaggtatccaaaatatgctttttgccagcatcgtggaagaa
atccagtgtatgattgaaaatacagactatacgctgatcgtatcctatttagatgaggat
gcagatgaggtggagcaggcagttctcctctgcagggagagaaagccgcttggactgctc
tttttaggaggtaatccggagtatttcaaaaaagaatttgcgcaggtcgatgtgccgtgt
gtgcttgtgacaaaccttgcagaccagatggattttccaaacctttcttctgttgcgaca
gacgatatcgccgctgcaaaatgtgcagtggatgcgttatttgatgcaggtcatacgaag
attggtattttaggtggagatattgaaaaatcgtacaccagccatcagcgttttatcggc
tgtcagcagagctttttggaacatgatactgtgtttgtgccggaaaaaagctacgaaaaa
gcacgattttcctatgacagcgcatatcgcggtatgaaacggctgatcgccaggtgtccg
gatatcacggctgtgtttgccatgtcggatgtcatggcgatcggtgcgatccgtgcactg
cgggatttagaataccgcgtgccggaggatgtgtcagtgattggatttgacggaacagct
ctggcagaatattacaatccgaaacttgcaaccattaaacagcagtatcagacacttgca
accagaagcgtggaaatcctgtttggacagattgagttaaagcggagtcagattcatgag
atcgttccgtttgaactggcaagtggagaaagtattcaaaaaatcaggtaa
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