Roseburia intestinalis M50/1: ROI_27300
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Entry
ROI_27300 CDS
T02598
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_27300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_27300
Transporters [BR:
rim02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ROI_27300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DUF87
MMR_HSR1
ABC_ATPase
AAA_23
ATP-synt_ab
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CBL09659
LinkDB
All DBs
Position
complement(2740303..2742057)
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AA seq
584 aa
AA seq
DB search
MTPMKWFFSFLKKYRGLMIIGILLTTAVSVLSVVNPYISGQIVDQVISGGRYDKLMSFIG
CLIGVTVVMGILRFLFQVAFETASQGILYDMRDKVYRKLLEEDFAFYNKKRTGDLMSRQT
GDMDAIRHFVAYVVYMVYQSVLMFVFALLMIFTVNTKLALAMLVVLPFTAFATYRQTKEV
RPAFKRNRDCFSSLNAFVQENVSGNRVVKAFAKEDFEIEKFNKENDKFRAAQIDASKIWM
KYVPIFEVLSYALTIILILYGGYMVIQGEITLGQLVTVNGYLWMLNNPLRQAGWLVNDIS
NFTTSVEKIYATYSEEPHVKTPVSGVVKKHLKGEIEFKNVSYRADDEDIVMDVNFKVKPG
QTVGIIGSTGAGKSTIMNLLCRFYDTTSGEVLVDGVNVRDMDLYNLRDNIGMAMQDVFLF
SDTIEGNIAYGRPNCSFEEVKQAAIMADANHFIQALPDGYDTIVGERGVGLSGGQKQRIS
LARALLKDPSILILDDTTSAVDMETESYIQSQLKKLDNKCTIFVIAYRISSIRDADLILV
MDNGRIIEQGTHEELVAAGGYYATAFHNQYGEIPQEILNGKGEK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaatgaaatggttcttttcatttctgaaaaagtaccggggactgatgataatt
ggtattttactgaccacagcggtatctgtgttatcggtggtcaatccgtacatatccggg
cagatcgtggatcaggtcataagcgggggcagatatgataagctgatgtcgtttatcggc
tgcctgatcggcgttacggtcgtgatggggatcttacgttttctgtttcaggtagcattt
gagacagcgtcgcagggtattttgtacgatatgagggataaggtttaccggaaacttttg
gaagaggattttgcattttataacaagaagcgtaccggggatctgatgagccggcagacc
ggagatatggatgcgatccgtcattttgtggcgtatgtggtctacatggtttatcagagt
gtgctgatgtttgtgtttgcgctgcttatgatctttaccgtcaatacaaaactggcactt
gccatgcttgtggtactgccgtttactgcatttgcaacttatcgtcagacgaaagaggta
cgtccggcattcaagcgtaaccgtgactgtttttcctcactcaatgcgtttgtgcaggaa
aatgtcagtggaaaccgtgtggtaaaagcatttgcaaaagaagattttgagattgaaaaa
ttcaataaggaaaatgataaattccgtgcggcgcagatcgatgcgtcaaagatctggatg
aaatatgtgccgatatttgaggtgctttcctatgcgctgacgatcatcctgatcctctac
ggcggctatatggtcattcagggagagatcacgttaggacagctcgtgacggtgaacggc
tatctgtggatgttaaacaacccgctgcgccaggcaggatggctggtcaacgatatcagc
aactttacaacgtccgtggagaaaatctatgcgacttacagtgaagagccgcatgtaaaa
acaccggtatctggagtagtgaagaaacatctgaaaggagagatcgagtttaaaaatgta
tcttaccgtgcggatgacgaagatattgtcatggatgtcaattttaaggtaaaaccgggg
cagaccgtcggcatcattggttctaccggagctggaaaatcaacgatcatgaatctgctc
tgccggttttatgatacgacttccggtgaagtgcttgtggatggtgtgaatgtccgcgac
atggatctttataacctgcgtgacaatatcggcatggcgatgcaggatgtgttccttttt
tcggatacgatcgaaggaaatatcgcatacggaaggccgaattgttcgttcgaagaagtc
aaacaggctgcgatcatggcggatgccaatcattttatccaggcacttccggatggatat
gatacgattgtgggtgagcgcggtgtcggactttccggcggacagaaacagcgtatctcc
cttgcgagggcactgctgaaagatccgtcgattctgattcttgacgatacgacatcggcg
gtcgatatggagacggagagttatatccagagccagttgaagaaattagataacaagtgc
acgatctttgtcattgcgtaccgcatttcttccattagagatgcagatctgatccttgtc
atggataacggacgtatcattgaacagggaacccatgaggaattggtggcagcaggcggt
tattatgcgacagctttccataaccagtatggtgagatcccacaggaaattttaaacgga
aagggggagaaataa
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