Roseburia intestinalis M50/1: ROI_28320
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Entry
ROI_28320 CDS
T02598
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
rim
Roseburia intestinalis M50/1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_8
Cas10-Cmr2_palm2
GAF
Motif
Other DBs
NCBI-ProteinID:
CBL09746
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Position
complement(2838174..2840825)
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AA seq
883 aa
AA seq
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MAFLSRKKEEDVLKSEQVLLDATLMQNLQDRFCDANNLYLRCLDKNRTEVTKTYGSKEEL
EYLGSVIDMDRHIGLLERLLNSRIESVIEEDCGADGIRMCGVAVKVSGEVSAIWIVTGVM
EDAGCDVPDYIMRTTPERYYKSIEFLETLSKQMFAVKLEELLAQEAFLKSRESEIQMETE
LKRNEAMTAIVRMLESEEGFDKIVHDILKEACEYLGISAAVLFRENIDGTTVNMISEYCS
AGRESRMEASQNISKEELPFFNGKPYMISADSMMPEAFRRMFEVQKMKAGLFLPIDVSGK
TGMYVCFCEDEKERIWDGGEIKFVNDVRRIIQTILVKRIAKNSLASSYASLEAILENVGC
GIYVMDTQENTILYTNQHFRKAFGEDVRSAGIEECLRQGAQSEDSLYFREVYSKEENRWF
DLHSTRINWVDGRKVLLCTIYDVTDKKLYQQKIERQANNDFLTGLYNRMRCEQDLERYIR
QTKEFGGEGALLYIDLDDFKHINDGLGHQYGDVLLKNISGSLQRIPGVENNCYRMGGDEF
IIILAHHHMAMLQQILDEIKALFTKPWMLKGTDYYCTMSMGVVRFPADGDTVEELIKKAD
IALYSAKCAGKNRIEFYDDNVESTSYKRLDLEKNMRNATRNAFSEFEVYFQPIVNITKEG
NPCAGAEALIRWNSGELGLIPPADFIPLAEYLGLINPIGEFVLREACIHCKYWNDMGHPE
YKVNVNLSVVQLLQNDIVERIARVIEETRITPQNLTLEVTESLAVNDMSRMKRILADIRH
LGVRVALDDFGTGYSSLNHIREMPIDVIKIDRCFIIDIGKDDFSNAFVKMVGELATAIHV
NVCVEGVETKEQLDALVGSKVQLIQGFYFGKPMKAEMFERQYL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttgagcaggaagaaggaagaggatgttttgaaatcagaacaggtacttttg
gatgcaacactgatgcagaatctgcaggatcggttttgcgacgcaaataacctgtattta
agatgtcttgacaaaaatcgcacggaagtgacgaaaacatatggttcaaaggaagaactt
gagtatctgggcagtgtgatcgacatggacagacatatcggactgttagagaggctgtta
aacagcaggatcgaaagtgtgatcgaagaggattgtggggcagacgggatccggatgtgt
ggagtggcagtaaaggtaagtggagaggtgtctgcgatctggatcgtgaccggcgttatg
gaagatgccggctgcgatgtgccggattatattatgcggacaacaccggaacgctattat
aagtcgatcgagtttttagagacgctgtcaaagcagatgtttgccgtcaaattagaagaa
cttttggcgcaggaggcatttttaaagagccgggagtcggaaatacagatggagacggaa
ttaaaacgcaatgaggcgatgacggcaatcgtccgtatgctcgagtcggaggagggtttt
gataagattgttcatgatatcttaaaagaagcatgtgagtatcttggaatttcagcggct
gttttattccgggaaaatatagacggcacgacggtcaacatgatcagcgagtattgttct
gcgggaagagaatcacggatggaggcatcacagaacatttcaaaagaagaactgccattt
tttaatggaaaaccatatatgatttcggcagattcaatgatgccggaagcgttccgcaga
atgtttgaagtacagaagatgaaagccgggttattccttccaatcgacgtcagcgggaaa
acgggaatgtacgtctgcttttgcgaggatgaaaaagagcgcatctgggacggcggagaa
atcaagtttgtcaatgatgtccgaagaatcatacagacgattctggtaaaacgcattgca
aaaaattcacttgccagttcgtatgcatcgttagaagcaatccttgaaaatgtgggatgt
gggatctatgtgatggatacacaggaaaatacgatcctgtatacaaaccagcactttcgt
aaagcatttggggaagatgtgcgaagtgcaggtattgaggaatgtttaagacagggagcg
caatcggaggacagcctgtatttcagggaggtttattcgaaagaagaaaaccgctggttt
gatctgcacagtacaaggattaactgggtggatggaagaaaggtccttttgtgtaccatt
tatgatgtgacagacaaaaagctgtatcagcagaagattgagcgtcaggcaaacaatgat
ttcctgaccggattgtataaccggatgcgctgtgaacaggatttagagcgttatatccgt
cagacgaaggagtttggcggtgagggagcgctgctttacatcgatctggatgattttaaa
catatcaatgacggactcggtcatcagtatggagatgtgctgcttaagaatatttccggc
agtctgcagagaattcccggtgtggagaataactgttaccgtatgggtggtgatgagttc
attatcatattggcgcatcatcatatggcgatgctccagcagatcttagatgagatcaag
gcgctgttcacgaaaccgtggatgctaaaagggacggattattactgtacgatgagtatg
ggagtcgttcgcttcccggcagacggggatacggtggaagaattgatcaagaaagccgat
attgcactttattctgcaaaatgtgcaggaaagaaccgtatcgagttttatgatgacaac
gtggagtccacctcttacaaacggcttgaccttgaaaaaaacatgcgcaatgccacacga
aatgctttcagtgaatttgaggtatatttccagccgattgtaaatattacaaaagaggga
aatccatgtgccggtgcggaggcactgatccgctggaattccggcgaactcggtctgatc
ccgccggcagatttcattccgcttgcagagtatttaggcctgatcaatccgatcggagaa
ttcgtcctgcgggaggcatgtatccactgcaaatactggaatgatatgggacacccggag
tataaggtgaatgtcaatctgtctgtcgtacagcttttacagaacgatattgtggagcgg
attgcgcgtgtgatcgaggagacgaggatcaccccacagaatctgactctggaagtgacg
gaaagtcttgctgtcaacgatatgagccgcatgaaacggatccttgcggatatcaggcat
cttggtgtgcgtgttgctctcgatgatttcggtacgggatattcatctttaaaccatatc
agggagatgccgatcgatgtcataaaaatcgaccgctgctttatcattgatatcggaaaa
gatgatttctccaatgcatttgtaaaaatggtcggagaacttgcaacagcgatccatgtg
aatgtctgtgtggaaggtgtggaaacaaaagaacagttagatgcactggtggggtcaaag
gttcagctgatccaggggttttattttggaaagccgatgaaggcggagatgtttgaaaga
cagtacctgtaa
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