Roseburia intestinalis M50/1: ROI_28390
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Entry
ROI_28390 CDS
T02598
Name
(GenBank) transcriptional regulator, GntR family
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rim03000
]
ROI_28390
Transcription factors [BR:
rim03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ROI_28390
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_11
HTH_41
HTH_DeoR
Rrf2
RPA_C
TrmB
HTH_Crp_2
STN1_2
Motif
Other DBs
NCBI-ProteinID:
CBL09753
LinkDB
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Position
complement(2845578..2846681)
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AA seq
367 aa
AA seq
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MDKKLKYYDLMEDLRKQIVSGKIKPGEKLPSENELSGTYQVSRQTVRKALQILQNEGYIY
AEHGRGTFCSEMARRTGETKNIAVVTTYLSDYIFPRVIQGIDKVLTENGYSILLKNTRNS
RNMEAKCLEELLQKGIDGLIIEPSKSQIFCKHINLYQTLDEYRIPYVFIQGSYAQLAEKP
HILLDDCLGGYLVTRYLISLGHHHIIGIFKADDTQGQQRHKGYVQALQEAGIAYDPDKVV
WFYTEDRKTHPYEQMCHMAKMRCEHFFDSVVSYNDQIALEVIRALEDEGLKVPDDVSVTG
YDDSYLASSGKVPLTTVAHPQEKLGEMAAELLLGLLKEGNIPESERQILVKPELVIRESC
RSRKKEE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagttaaaatattatgatctgatggaggacttaagaaaacagatcgtttca
ggaaaaataaagccgggagaaaaactgccatcggaaaatgaactttccgggacatatcag
gtaagcagacagactgtacggaaagctctgcagattcttcagaacgagggatatatttat
gcggaacatggacgtggaacgttttgttcggagatggcgagacgcacgggtgaaacaaaa
aatatagcagtggtcacgacatatctgtctgattatattttcccgagagtgatccaggga
attgataaagtccttacggaaaatggatatagtattcttttaaagaatacaagaaattcc
agaaatatggaagcaaaatgtttagaagaattattgcagaagggaattgatgggctgatc
atagaaccaagcaaaagtcagatcttctgcaaacatattaatttataccagacgctggat
gaatatcggattccatatgtatttattcagggcagttatgcgcagcttgcagaaaagccc
catatccttttagatgactgccttggaggatatctggttacaagatatctgatctcactg
gggcaccatcacatcatagggatatttaaagcggatgatacgcagggacagcagcggcac
aaagggtatgtgcaggctttacaggaagcagggattgcgtatgacccggataaagtggta
tggttttatacggaagaccggaaaacgcatccatatgaacagatgtgtcatatggctaag
atgagatgtgagcatttctttgacagtgtggtatcgtataatgaccagattgcactagag
gtcatccgggcattagaggatgaaggacttaaagtgccggatgatgtttcagtgacagga
tatgatgattcctatcttgcgtcaagtggaaaagtgccgcttaccacggtggcgcatccg
caggaaaaattaggtgaaatggctgcagaacttcttcttggactgctgaaagagggaaac
atcccggagtcagaaagacagatccttgtaaagccggagttagtgatccgggaatcctgc
agatcccggaaaaaggaggaataa
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