Roseburia intestinalis M50/1: ROI_28570
Help
Entry
ROI_28570 CDS
T02598
Name
(GenBank) Glycosidases
Organism
rim
Roseburia intestinalis M50/1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_2
Alpha-amylase
Ig_Eae
Ig_NUP210_5th
Big-like
X25_BaPul_like
Invasin_D4
Malt_amylase_C
Ig_NUP210_16th
TPR_6
Alpha-amylase_C_2
Cyc-maltodext_C
TPR_16
SusG_C
Motif
Other DBs
NCBI-ProteinID:
CBL09766
LinkDB
All DBs
Position
complement(2863408..2868930)
Genome browser
AA seq
1840 aa
AA seq
DB search
MRNKKILQKAAKKSLSWLLILGMLVTLPETPGAISAAAAELETGTEETVHEESSDADRVE
ETKNAVTEKTGETGTKADTAVQEETDTSQSQETKEPETETKDAEAENEDAETEDAEVAVT
EAETQDAETEAPVTETTEDETELSEETEETETEQEVKAVEGAMNLTLHMDNSSAKYKTPA
LQFWGDDNTIVSGTTEKNQEITGWEDAVGQLLTADKDGKFYSVTLNGNFTGFQFLDYADP
SKNTAGQGFVSTMKSYTGDTPTDLYYICKDGNWGWYLDAAGTEALKEPELVYLTMHIKPE
TKWSKPAMQHWNDKLTITDTKGQETITGWDVKGDLFTAEENGFYKLTVKGTFGGFQFVDV
DNADDTKTGDNTYDKLLDKFVAETPTDVYYIQKDGTWNWYMDKDGTITLASTKEVSDQAV
DNADGTTTFTAVAENVKDKVKVVYGKKSEVEEKGTSALKTVTMTADKSVANAYTTDAIFL
GDDALDIVYYIEVDGAKKDIETSAGVTVGKDTYLSYIRDKFTGRMVCIPGTFPGKSWDAA
SNIMTYMGEGLYSYTFKNVPAANYEYKITMGDWSENYGAGGVISGSNIAVTVTEPQDVTI
YYSDFSHYSKCSIDYKFGASLLLQGTGILADTRFSDSRLTGIYSATVANMEAGTYSDTKI
VSEDETVEMDPYTVDTTKDVTFYYDPESGIYYSNASDKEVATNKLVFDSKDTAYKSVYGA
VATGEEVTYSIDTGDDVTAVKLVVKGVEKKTLSMKKTAGAEDGKQRWSVTTSYDRLGEYQ
YFFAVYNETAVVMYGDDDGYYGTGMATDLLSLLPYDQIVYQSGYKTPDWMKNAVIYQIFP
DRFYNGDVTNDTITSDARGTVQYEYMNDWYILPENPEQITLHPDTYPTYAYKGDGNWSNE
IYGGDLKGITKRIDYLKALGVTVIYLNPVFESISSHRYDTSDYKNIDPILGTLGDFEELV
SVAEANNMHVVLDGVFNHVSDDSVYFDRYYEYLEDGTDTIGAYPYWAYVYDAMSEKKISK
EEAEKQAKEYFTAEYGITNYDYTEWFDVFSDTTLKDDNDDEVFDSVGLRAGKPVYGYDGW
WGYDSMPIIKATNGSEYQTGTWAEEVIGKNEISKTADNSVTQYWLSKGMDGWRLDVANEV
SDETWQHFRKSVKALDSDNVIIGEIWTDAVKYLMGDMYDSVMNYMFRGAAIAYAKGGNSA
DALNTLERLRERYPKEAFYAMMNLVDSHDTTRLLSYLDGINDDRNQKEISEAFPTYENTS
DEAKQKQYLVALMQFTYAGAPTIYYGDELGMVGADDPDDRRAMIWGEGNENLVKWYAKLA
AIRSSYSALRTGSVEPVYGTDKEILGYVRSDDSDIMLVLMNNSAADKSVTVNVAELGINA
AELADVITGNSCSAAGGSVTVNVPAYNGVILTDKGHVKQVSVDEENLKPGFDPAYKIKAE
ERAVKVTGVSLKKTEITLQKGKTANISENVVVAPQNATNTAVKYKTSDKTVASVDKDGNV
TANAKGTATITVTTKDGMFTSECKVTVGDQVQAAKIKLNKTKLSLKKGKTYTLKATVTPK
DCTDKSVKWKSSKSSVVKVDANGKVTAKKAGTATITAATKNGLKATCKITVTDPATKVYL
TPAMSIKKGSSVKLTASVFPKTATDKLTWSTSNKKVVTVTKSGKIKGVKTGTATITVKTT
SGKKATCKVTVVKSNKKSAGIKLSVKKLTLKQNATKQLKATLDKNATDKVTWSSSNKKVA
TVDKNGVVTAVKKGTVTITAKTSGGKKATCKVTVKVPATKVKLNKTKATVAKGRTLTLKA
TMTPSSSTDKLTWTSSNKKVATVDKNGKVKALKKEQPRLL
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaaaaagattttacagaaggccgctaagaaatcacttagctggcttttaatt
ttaggtatgctggtaacgttaccagagacgccgggagccatatctgcagcggcggcggag
cttgaaacggggacagaagaaacggtacatgaagaatccagcgatgcagatcgtgtggaa
gaaacaaaaaatgctgtgacagaaaaaaccggggaaacagggacgaaagcagataccgcg
gtacaagaagaaactgatacaagtcagagtcaggaaacgaaagagccggaaacagagacc
aaagatgcagaagcagagaacgaagatgcagaaacagaggatgcggaagtagcagtaaca
gaagcagagacccaagatgcagaaacagaggcacctgtaacagaaacaacggaagatgag
actgaattatccgaggaaacagaagaaacggaaacagagcaggaagtgaaagctgtggaa
ggagcaatgaacctgacactgcacatggataacagttctgcaaagtacaaaacgcctgca
cttcagttctggggagatgataacacaatcgtatctggtacaacggaaaaaaaccaggag
attacaggttgggaagacgcagtaggacagcttctgacagcggataaagacggaaaattt
tacagtgtaacattaaacggtaattttacgggattccagtttttagattatgcagatccg
tcaaagaacacagcaggacagggatttgtcagcactatgaaatcatatactggtgacact
ccgacagatctctattacatctgcaaagacggtaactggggctggtatttagatgcagca
ggcacagaagccttaaaagagccggaacttgtttaccttaccatgcatatcaaaccggaa
acgaaatggtcaaagccggcaatgcagcactggaatgacaaattgactatcactgataca
aaaggtcaggaaacgatcaccggctgggacgtaaaaggagatcttttcacagcagaagag
aatggattttacaaactcactgtcaaaggaacattcggaggctttcagtttgtagatgta
gataatgcggatgatacaaaaacaggtgacaatacttacgacaaactgttggataaattt
gtagcagaaacgccaaccgatgtatattatatccagaaagacggcacctggaactggtac
atggataaagatggaacaattacacttgcttccacaaaagaggtatcggaccaggcagtc
gacaatgcagatggaactaccacattcacggctgttgcagaaaacgtaaaagataaagta
aaggttgtttatggtaaaaaatcagaggtggaggaaaaaggaacttctgcattaaagacg
gttaccatgacagcagataaaagtgttgcaaatgcatataccacggatgcgattttcctt
ggagatgatgcattggacatcgtatattacatcgaagtagatggtgcaaaaaaagacatt
gaaacatccgctggtgttacagttggaaaagatacttatctttcttatatcagggataaa
tttaccggcagaatggtctgtataccgggtacatttcctggaaaaagctgggatgcagca
tcaaatataatgacatacatgggagaggggttatattcctatacatttaaaaatgttccg
gcggcaaattacgagtacaagattacgatgggtgactggagcgaaaactatggagcaggc
ggtgttataagcggatctaacattgcagttaccgtgacagaacctcaggatgttacgatt
tattattcggacttcagccattattcaaaatgcagtattgattataaatttggggcaagc
ctgttattgcagggaacaggaattctggcagatacaagattttctgacagcagattgacc
ggaatttacagcgcaactgtggcaaacatggaagctggtacttattccgatacgaagatc
gtatcagaggatgagactgttgaaatggatccatatacggtagataccacaaaggatgtt
acattctattatgatccggaatcaggcatttattattcgaatgcttctgacaaagaagtt
gcaacaaacaaacttgtatttgattctaaggatacagcttacaaatcagtatacggtgcg
gtggcaaccggagaggaagttacctactccatcgataccggagatgatgttactgcagtc
aaactggttgtaaaaggtgtggaaaagaaaacactttccatgaaaaaaacagcgggtgcg
gaagatggaaaacagagatggtctgttactacaagctatgacagacttggagaataccag
tatttctttgcagtatataatgagacggcagtggtaatgtatggcgatgatgacggatat
tacggaaccggtatggcaacagatttattaagcctgttaccgtatgatcagatcgtatat
cagtcaggttataagacacccgactggatgaaaaatgcagtgatctaccagatcttcccg
gatcgtttctataatggcgatgtgacaaacgataccatcacttcggatgcaagaggtacg
gtacagtatgagtatatgaatgactggtatattttaccggagaacccggagcagatcaca
ttacatccggatacctatccgacttacgcatataagggcgatggaaactggagcaatgag
atctatggtggagatttaaagggtattacaaaacggatcgactacttaaaagcacttggt
gttaccgtgatctacttaaacccggtatttgagtccatttccagccacagatacgataca
agtgattataaaaatattgatccgatccttggaacacttggagattttgaggaactggtc
agcgtagcagaagcgaacaatatgcatgttgtattggatggtgtattcaatcatgtatcg
gatgattctgtttattttgaccgttactatgagtatctggaagatggaaccgatacgatc
ggagcttatccttactgggcatatgtatacgatgccatgagcgagaaaaagatttccaaa
gaggaagcagaaaaacaggcaaaagaatattttacggcagagtatggaattacaaactat
gactatacagaatggtttgatgtattttccgatacaactttaaaagatgacaatgacgat
gaagtatttgattccgtaggacttcgtgccggaaaaccagtatatggttatgatggatgg
tggggttatgactccatgccgatcatcaaggcaacgaacggttccgaatatcagaccggt
acctgggcagaagaagtaatcggaaaaaatgaaataagtaagaccgcagataacagtgta
acacagtactggctgtcaaaaggaatggacggatggagactcgatgttgccaatgaagta
tcggatgagacctggcagcatttccgtaaatccgtaaaggcacttgacagtgataatgtg
atcatcggagagatctggacggatgcagtcaaatatctgatgggtgacatgtatgattct
gttatgaactatatgttccgtggagcagcaatcgcttatgcaaagggcgggaattccgca
gatgcattaaatactttagagcgtttgagagagcgttatccgaaagaagcattttatgcg
atgatgaaccttgtcgattctcatgatacaacacgtctgttatcctatttagacggtatt
aatgatgacagaaaccagaaggaaatttcagaggcattcccgacctatgaaaatacttca
gatgaggcaaaacagaaacagtatttagttgcattgatgcagtttacctacgcaggtgca
ccgaccatctattatggtgatgagcttggtatggtaggtgcagatgatccagatgaccgc
cgtgcgatgatctggggcgaaggaaatgagaatctggtaaaatggtatgcaaaacttgct
gcaataagaagcagttacagtgcattgagaacaggctccgtagagccggtatatggcaca
gataaagaaattttaggctatgtcagaagtgatgattcggatatcatgcttgttttgatg
aacaacagtgcagcagacaagtctgtgacagtaaatgttgcagaacttggaattaatgca
gcagaacttgcagatgtgatcacaggaaacagctgcagtgcagcaggcggcagtgtaacg
gtaaatgttccggcatacaatggtgtgatcttaacagacaagggtcatgtaaaacaggtt
tctgtggatgaagaaaacttaaaacctggttttgatcctgcatataagattaaggcagaa
gaacgtgcagtcaaagtaacaggagtttcactgaaaaagacagagattaccttacagaaa
ggtaaaacagcaaatatttctgaaaatgtagtagtagcaccgcagaatgcaacaaacaca
gcagtaaaatacaagacttctgacaaaacagttgcttcagttgacaaagatggtaatgta
actgcaaatgccaaaggaactgcaacaattaccgtgacaacaaaagacggaatgtttaca
tcagaatgtaaagtaactgtaggagatcaggtacaggcagcgaagatcaaattaaacaag
acaaaactcagcctgaaaaaaggaaaaacatataccttaaaggcaacagtcactccgaag
gattgtacggataaatccgtgaaatggaaatcttccaaatcctctgttgtaaaagtagat
gcaaacggaaaagtaactgcaaagaaagcaggaaccgctacaattacagctgccacaaag
aatggtttaaaggcaacctgtaagatcacggttacagatccggcaaccaaagtatatctg
acaccggcgatgagtatcaaaaagggaagttccgtaaaactgacagcatctgtatttccg
aagacagcgacagataaacttacatggtctacatcaaacaaaaaggtagtgacagtaaca
aagagcggtaagatcaaaggagtcaaaacaggaacagctacgattacagttaaaacaaca
agtggaaagaaagcaacctgtaaagtgaccgttgtaaagagtaataagaagtcagcaggt
attaaactgagtgtaaagaaactgacattaaagcaaaatgcaacaaaacagctgaaagct
actcttgataagaatgcaacggacaaagtgacatggagcagttctaacaagaaagtagct
acagtcgataaaaatggtgttgtaacggctgtaaagaaaggtactgtaacgattaccgca
aagacatcaggtggaaagaaagcaacctgtaaagtgacggtaaaagtaccggcaaccaag
gtaaaattaaacaaaaccaaggcgactgttgcaaagggcaggactctgaccttaaaagcg
actatgacaccttcttcctcaacagataaacttacctggacgagttccaacaaaaaagtg
gcaacagttgataagaatggtaaagtaaaggcactgaaaaaggaacagccacgattactg
taa
DBGET
integrated database retrieval system