Roseburia intestinalis M50/1: ROI_28990
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Entry
ROI_28990 CDS
T02598
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_28990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_28990
Transporters [BR:
rim02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ROI_28990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
TsaE
AAA
RsgA_GTPase
AAA_23
AAA_29
SRP54
MMR_HSR1
OmdA
DUF677
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CBL09797
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Position
2907376..2909169
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AA seq
597 aa
AA seq
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MAVNSYREDEFMENTDKKKIMRRLFSYLLAYKGTIIAVLVCMGITVAISLVNPLLIEEAI
DHYIAQSDLHGLIGLGIFALVLNLIFIVMVKLRMYAMAVISNKILLQIRQDLYEHIQTLS
FSFFDSRPTGKILARIIGDVNSLKDVLVNVVTTLVPEFVTVVGVVVIMLVKDWRLALASL
STIPLMIAGIWFVQTASHKRWQIFRKKASNLNAYVHEDIAGMNVVQSFAAEDETQEIFEG
LTDEHQRSFVDAVTYADMFGPVIDFCWGFGAMMLYLVGIRFLGFEKVSVGLLVAFGTYIN
MFWNPIMNLSNFYNNLVTNLTAAERIFDILDTDADIVDAKDVTELPDIEGSVEFSHVSFT
YDKGTPAETKVLSDVSFSVKPGETIALVGPTGAGKTTIVNLISRFYDIEDGKILVDGYDL
TKVSIESLRRQMGVMTQDNFIFHGTVRDNILYGKLDATDEEMIAAAKAVNAHDFIMKMEK
GYDTELKEHGAGLSIGQRQLIAFARTMISMPKILILDEATSSIDTHTELLVQQGIEALLS
GRTSFVIAHRLSTIQNADRIFVIDKGGILEQGSPAELMEKKGAYYKLYMAQFAGLQE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaattcgtatcgtgaagacgaatttatggaaaataccgacaagaaaaaaatc
atgcggcggctgttttcctatctgcttgcgtataaaggcacgattattgccgtgttagta
tgtatgggaattacggtggcgatctcactggtaaacccgctcttgatcgaggaagcaatc
gatcactatattgcacagtccgatctgcatgggctgattgggcttggaatttttgcactc
gtgttaaacctgatctttattgtgatggtaaaactcagaatgtatgcaatggcggtgatc
tccaacaaaattttgcttcagatccgccaggatctctatgagcacatccagacgctgtcg
ttttcattttttgacagcagaccgaccggaaaaatccttgcgcgtatcatcggggatgtc
aattccttaaaagatgtgctggtcaatgtggtcacaacactggtgccggaatttgtgacg
gtagtcggagtcgttgtgatcatgctggtaaaagactggcggcttgcgcttgcgtctctg
tccacgatcccgctgatgatcgcgggaatctggtttgtacagacggcatcccacaaacgc
tggcagattttccggaaaaaggcatcaaacttaaatgcttatgtgcatgaggatattgct
ggaatgaatgtggttcagagttttgcggcagaagatgagacacaggagatttttgaagga
ctgacggacgaacatcagagatcatttgtggatgcggtaacttacgctgacatgtttggc
ccggtcattgatttctgctggggatttggtgcgatgatgctttatctggtcggcatccgt
tttctgggatttgaaaaagtatcggtcggacttctggttgcattcggaacttatatcaat
atgttctggaacccgatcatgaacttgagcaatttttataacaatcttgtcacaaatctt
acggcggcagagcgtatttttgatatcttagataccgacgctgacattgtggacgcaaag
gatgtgacagagctgccggatatagagggaagtgttgaattttcacatgtaagttttact
tatgataagggaacaccggcggagacaaaggtactctctgatgtcagtttttctgtaaaa
ccgggtgagacgatcgcactggtaggaccgaccggagcaggaaaaacaacgatcgttaat
ctgatcagccgtttttatgacattgaagacggcaaaattttagtggatggttacgacttg
acaaaggtttccattgagagcttaaggcgtcagatgggtgttatgacgcaggataatttt
atctttcatggaacagtccgtgacaacattttatatgggaaattagatgcgacagatgaa
gaaatgatcgcggctgcaaaggcagtcaatgcgcatgatttcattatgaaaatggaaaaa
ggttatgacacggaattaaaagaacatggggcaggactttccatcggacaaagacagctc
atcgcatttgcgagaacgatgatttccatgccgaaaatcctgatcttagatgaggcaaca
tccagcattgatacacatacagaacttttagtgcagcagggaatcgaggcgctgctttcc
ggcagaaccagttttgtgatcgcacacagactctccacgattcagaatgcggaccgcatt
tttgtgatcgacaagggcggtattttagaacaaggaagtccggcagagctgatggagaaa
aagggcgcttattataaactttatatggcgcagtttgcaggtctgcaggagtaa
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