Roseburia intestinalis M50/1: ROI_29770
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Entry
ROI_29770 CDS
T02598
Name
(GenBank) Major Facilitator Superfamily.
KO
K08217
MFS transporter, DHA3 family, macrolide efflux protein
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_29770
01504 Antimicrobial resistance genes [BR:
rim01504
]
ROI_29770
Transporters [BR:
rim02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-3 (12 spanner) (DHA3) [TC:
2.A.1.21
]
ROI_29770
Antimicrobial resistance genes [BR:
rim01504
]
Gene variants
Macrolide resistance genes
Transporters
ROI_29770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_3
DBD_HTH
DUF7539
Motif
Other DBs
NCBI-ProteinID:
CBL09867
LinkDB
All DBs
Position
complement(2995231..2996418)
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AA seq
395 aa
AA seq
DB search
MKDKSLTRVSVFLTSQIISLFGSAIVSYSIVWYITLKTSSTMALAISIVCTYMPQIVISM
FSGTWGDKFNKKNLIIIGDTITGISTLILAILFINGFDSLYLLYGACALRSVGSGIQTPL
EHAFLPLICPEEKLTKINGIYATASSAINILSPAMAGVLLNVMDFGHTLFIDCITALLAI
IVLLKLKYKNTISSNKDTSTLSDFLEGVKYFKQHIFLGRLILFYLLFYFFMSAPAFLTPV
LVNLKFSSSVNALAINEFVWSLGTMLGGILICSFKEFNKLKFMAISALLFGGFICLLGAS
NIFSIYILFMLCSGISLPLFNTSNTVLIQENVKKEMLGRVFANLNILSTISTTIGITVFG
IIGNTISVDILLILVGAFIAILSIWIWKIYRENKV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaaagtttaacgcgtgtttcagtctttcttaccagtcaaataatctcctta
tttggctctgccatagtgtcttattctattgtttggtatataacactaaaaacatcatca
acaatggctcttgcaatatctatagtttgtacttatatgccgcagattgttatttctatg
ttttcaggaacgtggggggataaattcaacaaaaaaaatctaattataataggcgatacg
attactggtatttctacattgatactagcaattttatttataaatggttttgattcatta
tacctactatacggtgcttgtgcgttgagatcggttggttcaggaatacaaacaccatta
gaacacgcctttttaccgctgatttgccctgaagaaaaattaacaaaaataaatggaatc
tatgctactgcttcatcagcaatcaatattttatctcctgctatggcaggtgttttatta
aatgtaatggattttggacataccctctttattgactgtatcacagcactattggcgatt
attgtactattaaagctaaaatataagaacacaataagttctaacaaggatacaagtaca
ctgtctgattttttggagggagtaaaatatttcaagcagcacattttcttaggaagattg
attttattttatttgcttttttatttctttatgtcagcaccagcttttttaacgccagta
ttggtaaatcttaaatttagcagtagtgttaatgctttggcaatcaatgaatttgtatgg
tcattaggaactatgttaggcgggattttgatttgttcttttaaagagtttaataaacta
aaattcatggcaatatcagcattgctttttggaggttttatttgtcttttaggggcgtca
aatatttttagtatatatattctttttatgctatgctcaggaatatctcttcctttgttc
aatacatcaaatactgttttaatacaagaaaatgtaaaaaaagagatgttaggacgcgtt
tttgctaacttaaatatattatctacaatttctacgacaataggaattactgttttcgga
ataataggtaatacaatttccgttgatattcttttgattttagttggagcatttatagca
atattgtctatttggatatggaaaatttatcgtgaaaacaaagtgtag
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