Roseburia intestinalis M50/1: ROI_32280
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Entry
ROI_32280 CDS
T02598
Name
(GenBank) hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region
KO
K01678
fumarate hydratase subunit beta [EC:
4.2.1.2
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00020
Citrate cycle (TCA cycle)
rim00620
Pyruvate metabolism
rim00720
Other carbon fixation pathways
rim01100
Metabolic pathways
rim01110
Biosynthesis of secondary metabolites
rim01120
Microbial metabolism in diverse environments
rim01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ROI_32280
00620 Pyruvate metabolism
ROI_32280
09102 Energy metabolism
00720 Other carbon fixation pathways
ROI_32280
Enzymes [BR:
rim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
ROI_32280
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Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
CBL10083
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All DBs
Position
complement(3220066..3220614)
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AA seq
182 aa
AA seq
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MDKHITTPITEEVTKDLKSGDYVYITGTIYVARDAAHKRMIEALQRGEELPIDIKDSTIY
YMGPSPAREGRPIGSAGPTTATRMDRYAPTLLDLGEKAMIGKGKRSKEVIDAIVRNHAVY
FAAVGGAGALLSKCITKSEIVCYEDLGAEAIRKIEIKDFPVIVVIDSQGDNLYETAVKEF
AG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggataagcatattacgacgccgatcacggaagaagtgacgaaagatttaaaatcaggt
gattacgtttatattacaggaacaatctatgtggcaagagatgccgcacacaaaagaatg
atcgaggcactgcagcggggagaagaactgccgatcgatatcaaggacagtaccatttat
tatatgggtccatctccggcgcgcgagggcagaccgatcggttctgcaggaccgaccaca
gccacccgcatggacagatatgcaccgacactgcttgatctcggggaaaaagcgatgatt
ggaaaaggaaaacgttcaaaggaagtcattgatgccattgtgcgcaaccatgcagtttac
tttgcagcagtcggcggtgcaggggcacttttatcaaaatgtattacaaaatcagagatc
gtatgttatgaggatcttggggcagaggcaatccgtaagatcgaaatcaaggattttccg
gtgatcgttgtgatcgatagtcagggggataatctctatgagacggcagtcaaggagttt
gcaggttag
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