Roseburia intestinalis M50/1: ROI_32430
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Entry
ROI_32430 CDS
T02598
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rim03032
]
ROI_32430
03400 DNA repair and recombination proteins [BR:
rim03400
]
ROI_32430
Enzymes [BR:
rim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ROI_32430
DNA replication proteins [BR:
rim03032
]
Prokaryotic type
DNA Topoisomerases
ROI_32430
DNA repair and recombination proteins [BR:
rim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ROI_32430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
crAss001_48
Motif
Other DBs
NCBI-ProteinID:
CBL10097
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Position
complement(3233908..3236532)
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AA seq
874 aa
AA seq
DB search
MDDKIFDQIHDVDLKKTMETSYIDYAMSVIAQRALPDVRDGLKPVQRRVLYSMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYGALVNMAQEWSTRYPLVDGHGNFGSVDGDGAAA
MRYTEARLSKISMEMLADIGKDTVDFVPNFDETEKEPTVLPSRYPNLLVNGTTGIAVGMA
TNIPPHNLREVINAVVKIIDNKVEEDRDTDIEELLSIVKGPDFPTGGMILGTAGINEAYR
TGRGKVRVRAITDIEPMQNGKNRIVVTELPYMVNKARLIEKIAELVRDKKVDGITDLRDE
SDRQGMRICIELRRDVNPNVVLNLLYKHTQLQDTFGVIMLALVNNEPKVLNLYDMLKYYL
IHQEEVVTRRTKYELNKAEERAHILEGLLIALDNIDEVISIIRSSQNTQEAKSRLMERFS
LSDAQSQAIVDMRLRALTGLEREKLEAEYAELMDRIAELRAILADKKKLLGVIRTEILLI
ADKYGDDRRTSIGFDEYDISMEDLIPVTNTVITMTKLGYIKRMSLDNFRAQNRGGKGIKG
METIDDDYIEELLMTTSHHYMMFFTNTGRVYRIKAYEIPEASRTARGTAIVNLLQLQPGE
KITAVIPIREYTEGHFLFMATKKGIVKKTPITDYANVRKTGLAAISLREDDELIEVKKTD
NNQDVFLVTKYGQCIRFKETDVRKTGRTSMGVIGMNLTDGDEVIGMQMQSQGDALMIVSE
KGLGKCTLISEFTTQNRGGKGVKCYKITEKTGNIVGVKAVNQDNELMLITTEGIIIRIKV
SDTTLLGRITSGVKLINLDENVTVASIAKVREDKSLIDNADTSELLSEEEEKESAAIAAE
NAKKASVENTETDDELMKELLERAEADGSEDEEE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggatgataaaatttttgatcagattcatgacgtcgatttgaaaaaaacgatggaaaca
tcctatatcgattatgccatgagtgttatcgcgcagcgtgcgctccctgatgtaagggat
ggtttaaaaccggtacagcgccgtgtgctttactcaatgatagagctgaacaatggtccg
gataagccgcatcgtaaatgtgcgcgtatcgtcggtgatacgatgggtaaataccatccg
cacggagacagttctatttatggagctcttgtaaatatggcacaggagtggtcgaccaga
tatccgttagttgacggtcatggaaactttggttccgtggacggtgacggcgcggctgcc
atgcgatatacggaggcacgtctcagtaaaatttccatggaaatgcttgccgatattgga
aaagacaccgttgatttcgttccaaactttgatgagacggagaaagaacctaccgttctg
ccatcccgttatccgaaccttttagtaaacggaactaccggtattgccgttggtatggca
acaaatattccgccgcacaacctgcgcgaagtcatcaatgccgtagtaaagatcattgac
aacaaagtcgaggaggaccgcgataccgatatcgaagaattactctctatcgtcaaggga
ccggacttccctaccggaggcatgattcttggaacagccgggattaatgaggcttaccgt
accggacgtggaaaagtccgtgtgcgtgcaattacagatatagaaccaatgcaaaacggc
aaaaaccgtatcgtggtaaccgaacttccgtacatggttaataaagcgagactgatcgag
aagatcgccgagttagtccgcgataaaaaagtggatggaatcacagatctgcgtgacgag
tccgaccgtcagggtatgcgtatctgtatcgaactccgccgtgacgtcaatccgaatgtc
gtattgaatttactttacaaacatacacagcttcaggatacttttggcgtgatcatgtta
gcactggtaaataacgagccgaaagttttaaacctctacgacatgttaaagtattacctg
atccatcaggaagaggtcgttaccagaagaaccaaatacgaattaaacaaagcggaagaa
cgcgcccacattttagagggcttgctgatcgcacttgacaatatcgatgaagtcatcagc
atcataaggagcagccagaatacgcaggaagcaaaatcacgtttgatggagcgtttctcc
ttaagcgatgcacagtcacaggcaattgtagatatgcgtctgcgtgcactgacaggtctg
gaacgcgaaaaacttgaggcagagtatgcagagctgatggaccgcattgcagaattgcgt
gctattttggcagataagaaaaaactgctcggcgtgatccgtacggagattctgctgatt
gctgataaatacggcgacgacagaagaacatccattggctttgacgagtacgacatttcc
atggaggatctgattccagtaacaaacactgtcattaccatgacaaaattaggttacatc
aagcgcatgagccttgacaatttccgcgcacagaaccgtggcggtaagggaatcaaggga
atggagacgatcgatgacgattacatcgaagaacttttgatgacgacatcccatcactac
atgatgttcttcacaaacaccggacgtgtataccgtatcaaggcttacgagatcccggag
gcaagccgtaccgcgaggggaactgcaatcgtaaacctgctccagctccagccgggcgag
aaaattacggcagttatcccgatccgtgaatacacggaaggacatttcctgttcatggcg
acaaagaaaggcattgtgaagaaaacaccgattaccgactatgcaaatgtcagaaagaca
ggacttgctgcgatcagtttaagggaagatgatgagctgatcgaggtaaaaaagacagat
aacaatcaggatgttttcttagtgacgaaatatggtcagtgtatccggtttaaagagaca
gatgtaagaaaaacaggccgtacttccatgggagtcatcggtatgaatcttacggatggg
gatgaagttatcggtatgcagatgcagtcccagggggatgcactcatgatcgtttcagaa
aaaggtcttggaaaatgtacactgatctccgaatttaccacgcagaaccgtggcggtaag
ggtgtaaaatgttacaagatcaccgaaaagactggaaatattgtcggcgtgaaagcggta
aaccaggacaatgaactgatgctgatcaccaccgaaggaattattatccgtatcaaagtc
agtgatacaacgttgctcggaagaattacttccggtgtcaaactcatcaacttagatgag
aatgtcactgtggcaagtatcgcaaaagtgcgtgaggataagagtctgatcgacaatgca
gacacatccgaactgctcagtgaggaggaagaaaaggaaagtgcagccatcgctgcggaa
aatgcaaaaaaggcatctgtagaaaatacagagacagacgacgagctgatgaaagaactg
ttagagcgcgcagaggctgatggttccgaggatgaggaagaatag
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