Roseburia intestinalis M50/1: ROI_36000
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Entry
ROI_36000 CDS
T02598
Name
(GenBank) monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
KO
K10540
methyl-galactoside transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
rim02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_36000
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
ROI_36000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_36000
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Methyl-galactoside transporter
ROI_36000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Latrophilin
New_glue
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
CBL10395
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Position
3606268..3607419
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AA seq
383 aa
AA seq
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MKRKVVSVILATAMVASMVAGCGGSNNASTNNAGTTTDAAASDASSDTSNDAAATEAADA
GDAAADAATDADASLADKKVGVCIYQFSDNFMTLFRTELENYLVEKGFSKDNITIVDGAN
DQATQTGQIDNFITEGVDVLIINPVNSSSAATITDKVVAAGIPLVYINREPDEEEQKRWS
DNNWDVTYVGCDARQSGTFQGEMISDLGLDTVDLNGNGKIDYVMVEGDPENVDAQYRTEY
SVKALEDAGLEVNCLSDQVGNWQQDQAQQIVANALGQYGNDVEVVFCNNDAMALGALQAI
QSAGRTVGTDIYLVGVDALSEALEDVLAGTMTGTVFNDHFSQSHSAADAAINYITGAGND
HYIGCDYVKVTKDNAQDVLDMVK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaggtagttagtgtaattttagcaacagcaatggtagcatctatggtagca
ggatgtggcggaagcaataacgcatccacaaacaatgccggaacaacaaccgatgcagca
gcaagcgatgcatcaagtgatacatcgaatgatgcagcagctacagaggcagccgatgca
ggggacgcagcagccgatgcagcaacagacgcagatgcaagtttagcagacaaaaaagtt
ggtgtatgtatttaccagttctccgataacttcatgacactgttccgtacagagcttgaa
aattatctggtagaaaaaggattttcaaaagacaatatcacaattgttgatggtgcaaac
gatcaggctacacagacaggtcagattgataactttatcacagagggggtagatgtcctt
attatcaacccggttaactcctcttccgcagcaaccatcacagataaagtagttgcagca
ggaatcccgctggtatacatcaaccgtgagccggatgaagaagagcagaagagatggtca
gataacaactgggatgttacatacgttggatgtgatgcacgtcagtccggtactttccag
ggtgagatgatcagtgatcttggtcttgataccgtagatttaaatggaaacggtaaaatc
gactacgttatggtagaaggtgatccggagaacgtggatgcccagtatcgtacagaatat
tctgtaaaagctcttgaggatgcaggacttgaagtaaactgcttatccgatcaggttggt
aactggcagcaggatcaggcacagcagatcgtagcaaatgcccttggacagtacggtaac
gatgtagaagttgtattctgtaacaacgatgcaatggcacttggtgctttacaggcaatc
cagagtgcaggacgtaccgtaggtactgatatttatctggtaggtgttgatgcattatca
gaggcattagaggatgttcttgcaggaaccatgacaggtactgtatttaacgatcacttc
tcacagtcccacagtgcagcagatgcagctatcaactacatcacaggcgctggcaatgat
cactacatcggatgtgattatgtaaaagtaacaaaagacaatgcacaggatgttcttgac
atggttaaataa
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