Roseburia intestinalis M50/1: ROI_40430
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Entry
ROI_40430 CDS
T02598
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
rim
Roseburia intestinalis M50/1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
CBL10769
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Position
4041784..4045083
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AA seq
1099 aa
AA seq
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MFSISDIKQEAYPAAYRRGKELYERGLVQEFSYDVYTEDGVPKAELIGRVKGTVEDHYDV
RLVIDEEYAEVSESRCNCEAFCNYEGICKHCVAVALAYVNRRQAKDILNAKLGVSEKTEQ
KNIRTEKELKTDTSLKNLLNRYSMRAGSTYLLPENIYGKVELEPYFKMEYSYATVEFKIG
MEQKYVLKNISAFLHSIKINEKVRYGKKLEFYHHLDAFTESAKRMIAFMEQQEMDKRRQS
QFHAYYAYTGSYERTMELDSVGIDRFFEAVGDMPFEAEVGFLPEDTYTFSPEEKRPKLVI
RQGGSGIFLMLEDDSVIIGEKYFYFYDADMIYRSPAGMKETVGEFFEFLHRQTGGQTYIA
ADELAMFCRDLLPLLKKYFKVEKEAGFDESLYVPPKPEFELYLDRQDMNTVGAKLMAAYG
DDKYNVLEKIAPGEVRDLAEELRIKNLVEPYFNEYALSQTVFVLKNNEEMLYQLVSGGLR
RLGEFMTIYTTENFRNLKVVSSPAVSVGISLKSDLLELKIHSDEMSREELAYLLSKYDRK
KKYIRLKNGDFLNIEEDGLSTLAEVSEDLRLTETNLKKGTLIVPKYRAMYLDAALKNNQL
LSIEKNKEFKGMVRNMKTIEDSDYEVPEALNSIMRSYQKNGFLWLKTLRENGFGGILADD
MGLGKTLQVISLLTAEQQEMQAGEKELRRSLIVCPASLVYNWQKEITRFAPQLKTVIVAG
SVPDRASIIRHSKEGEILITSYDLLKRDAEVYQKFVFAIQVIDEAQYIKNPSTQAAKGVK
KITAAFKLALTGTPIENRLSELWSIFDYLMPGFLYTYQKFREEIELPIAVNQDANKMERL
QRMIRPFILRRLKGDVLKDLPEKIEENVFARLDGEQMQLYDAYATRMKEMLSQQNEKEFH
KGRMQILSELTKLRQLCCDPGLLLEDYHGESAKTDMCMELIVNAVGAGHKILLFSQFTSM
LDRLTERLKKEGIDYYLLTGSVNKEKRMQMVESFNNDDVPVFCISLKAGGTGLNLTSADI
VIHYDPWWNVAVQNQATDRAHRIGQKHVVTVYKLVAEGTIEEKIIDIQERKKKLAEQVLE
GEGMDSASFTKEEILELLG
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgttttccatatcagacattaagcaggaagcatatccggcagcataccgccggggaaag
gaattgtatgagcgtggactcgtgcaggaattttcctatgacgtatacacggaagatggc
gttccaaaggcagaattaattggaagagtaaaaggaacagtcgaggatcactacgatgtc
cggcttgtgatagatgaagaatatgcggaagtttcagagagccgctgcaactgtgaggcg
ttttgcaactatgagggcatctgcaagcactgtgttgccgttgcgcttgcctatgtgaac
cgcagacaggcgaaagatatcttaaatgcaaaacttggagtaagcgagaagacagagcag
aagaacatccgcacggaaaaagagttaaaaacggatacttcattaaaaaatctgttaaac
cgttattccatgcgtgcaggttccacctatcttttaccggaaaatatttacggcaaggtg
gagttagagccttatttcaagatggaatacagttatgccacggtggaatttaagattgga
atggagcagaaatatgtactcaaaaatatttctgcatttttacactcgattaaaatcaat
gaaaaagtccgttacggtaaaaaactggagttttatcatcatctggatgcatttacggaa
tctgcaaaacgtatgattgcatttatggaacagcaggagatggataaaagacgtcagagc
cagttccatgcatattatgcgtatacgggcagttatgaacgcacgatggagttagacagt
gtggggatcgaccgtttttttgaggcagtcggggatatgccgtttgaggcagaggtagga
tttttaccggaggatacctatacattttcaccggaagaaaagcgtccgaagctggttatc
cgtcagggcggttccggtatctttctgatgctggaagatgattctgtgatcatcggtgaa
aaatatttttatttctatgacgcggatatgatctaccgcagtccggcaggaatgaaagaa
acggtcggagaattttttgaatttctgcaccgccagaccggaggacagacttatatcgct
gcagatgagcttgccatgttctgccgcgacctgcttccattactgaaaaaatattttaaa
gtggaaaaagaggcaggatttgatgagagcctttatgtgccgccgaaacctgagtttgaa
ctttatttagacagacaggatatgaatacggtaggtgcaaaactgatggcagcttacggg
gatgataaatataatgtcctcgagaagatcgcaccgggtgaagtgcgcgatctcgcagag
gaactccgcatcaaaaatcttgtggaaccgtatttcaatgaatatgcgctgtcccagaca
gtctttgtgctgaagaacaatgaggagatgttgtatcagttagtttcaggtggattgaga
agactgggtgaatttatgaccatttatacaacggaaaatttccgcaatttaaaggtggta
tcttccccggccgtttccgtgggtatctcgttaaaaagtgatcttctggaattaaaaatt
cattccgatgagatgtcacgggaggaacttgcctacctgctctcaaaatatgacaggaaa
aagaagtatatccgtttgaaaaacggcgactttttaaatattgaagaggacggtttaagt
acgttggcggaagtcagcgaggatctgcgcctgacggagacaaatctcaaaaaaggcact
ttaattgtaccaaaataccgcgcaatgtatctggacgcggcattaaagaacaatcagctt
ctctcgatcgagaaaaataaagagttcaagggcatggtccgcaacatgaagacgatcgag
gacagtgactatgaagtgccggaagcgctgaattctattatgagaagttaccagaagaat
ggattcctgtggttaaagacgctgcgtgagaatggattcggcggtattttagccgatgat
atgggacttggaaagacgcttcaggtcatcagccttttaacggcagaacagcaagaaatg
caggctggggaaaaggaactgcgccgttccctgatcgtgtgtccggcatctctggtctac
aactggcagaaagagatcacacgctttgcaccacagttaaaaacagtcattgttgccgga
agtgtaccggatcgtgcgtcgatcatccgtcacagcaaagagggagaaatccttattact
tcgtatgatctgttaaaacgtgatgccgaagtgtaccagaagtttgtatttgcgattcag
gtcatcgatgaggcacagtatatcaagaacccgtccacacaggcggcaaaaggtgtcaaa
aagatcactgcggcattcaagctggcattgaccggaacaccgatcgaaaacagactcagt
gagctctggagtatttttgattatctgatgccgggatttttgtatacctatcagaagttc
cgggaggagatcgagcttccgatcgctgtgaatcaggatgcaaacaagatggagcgttta
cagcgcatgatccgtccgtttattttaagacgtctgaaaggggatgtgttaaaagacctt
ccggagaagatcgaagaaaatgtattcgcaagactcgatggcgaacagatgcagttatat
gatgcttatgcgaccaggatgaaggaaatgcttagccagcagaatgagaaagagttccat
aaaggcaggatgcagatcctttccgaacttaccaaactgcgtcagctctgctgtgatccg
ggacttttactggaagattaccatggagaatccgcaaagaccgacatgtgtatggaattg
atcgtaaacgcagtcggagcaggacacaagatccttctgttctcgcagtttacatccatg
ttagaccgtctgacagagcgcctgaaaaaagaaggaatcgactactatcttctgaccggt
tctgtaaataaggaaaaacgtatgcagatggtggaaagttttaataacgatgatgttccg
gtattctgtatcagcttaaaggcgggtggaaccggattaaaccttacctccgcggacatc
gtcatccactacgatccgtggtggaatgttgccgtgcagaaccaggcgacagaccgtgcg
caccgtatcggacagaagcatgtcgtgacggtatacaaacttgtggcagagggaacgatc
gaggagaagatcatcgatatccaggagcggaaaaagaaacttgccgagcaggtgctcgag
ggcgaaggaatggattctgcaagcttcacaaaagaagagattcttgaattgcttggctga
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