Roseburia intestinalis M50/1: ROI_41390
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Entry
ROI_41390 CDS
T02598
Name
(GenBank) LysM domain.
Organism
rim
Roseburia intestinalis M50/1
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Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
CBL10850
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Position
4139755..4141263
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AA seq
502 aa
AA seq
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MIEIIREENWDDTKEKKLPKDIRQIGRPDVGERIYIEDEVYRYLHPYESSCEKLVYVLLG
RFENYSGRQCTFVEAAIQLEHLEFDAEIPRWSDHEWAYIYKRLKDEYDSMVIVGWALDHR
GCLPNMTKQIEQFHQTHFGGVHQTLFLMDTLEKEETFFSIRNGHLYRREGFYIYYDRHAA
VKLKKMEHREEKTEEVNLPETDEVTFMQPDEPVYDIKEKEDTNDIDILEEELYMEESMQP
DEPGLQPHPERKRQGRYRKQLEEAEKTEEAKIPAYSSLVLAVVVLTLGFTAYQNHKKMNE
MENTLAQMNQVHIVTEMPETEKTADSGIVVENIAGSIEKQTETKQADEHSTQTEAEQLQT
NGTQAAEASAPDETAGIQAGTELSGMTDTEETAETSGTADAQKTMESQETESMQNREGEQ
KAEADTDETNSNKENVKETAAQPDEAQTYLKQGYYVVRQGDNLAAICRKIYQTTAMMDKV
CEANGIDDPDAIYAGQYLTLPN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgattgagattatccgggaagaaaattgggatgatacgaaagaaaaaaagctgccaaaa
gatatcagacagattgggagaccggatgttggggagagaatatacatagaggatgaagta
tacaggtatctgcatccatatgagagcagctgtgaaaaacttgtatatgttttgcttgga
agattcgaaaattacagtggaagacagtgcacatttgtggaggcagcaatacagctggaa
catttggaatttgatgcagagattccaagatggagcgaccatgaatgggcgtatatatat
aaacggttaaaagatgagtatgacagcatggtcattgttggatgggcattagatcacaga
ggatgtctgccgaatatgacaaaacagatcgaacagtttcatcagacgcattttggcggc
gttcatcagacattgttcttaatggataccctggaaaaggaggaaacatttttcagcatc
cggaacggacatctgtaccggagagaaggattttacatatattatgacaggcacgccgcg
gtaaaattaaaaaagatggaacacagggaagaaaaaacagaagaagtaaatttgccggag
acagacgaggttacattcatgcagccggacgagcctgtttacgacataaaagaaaaggaa
gatacgaatgatatcgatatcctggaagaagaactctatatggaagagagtatgcagccg
gacgagcccggactgcagccacatccggaacgaaaaagacaggggcgttatcggaaacaa
ctggaagaagcggaaaaaacggaagaggcaaagatccctgcatattcctccctcgtattg
gctgtggtggtactgactcttggttttaccgcttatcagaaccataagaagatgaatgag
atggaaaatactctggcacagatgaatcaggtacatatcgtgacagaaatgccggaaaca
gaaaaaacggcagattctgggatcgtggtggaaaatattgcaggaagtatagaaaaacag
acggagacaaaacaggcggatgaacacagtacgcagacagaggcggaacagcttcaaaca
aatggaacgcaggcggcggaggcatccgcaccggatgaaacggcagggatacaggcagga
acggaattgtcaggaatgacagatacagaagaaactgcagaaacgtctggaacagcagat
gcccagaaaacgatggagtcccaggaaacagagagtatgcagaatcgggagggagaacag
aaggcggaagcggacacagatgaaacaaacagcaataaggaaaacgtaaaagagacggcg
gcacagccggatgaggcacagacatatttaaaacaggggtactatgtggtgcggcagggg
gataatctggctgcgatctgccggaaaatatatcagacaacagccatgatggacaaagta
tgcgaggcaaacgggattgatgatccggatgcaatctatgcaggccagtatctgacgctt
ccgaattaa
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