Ralstonia insidiosa: ACS15_0558
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Entry
ACS15_0558 CDS
T04471
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rin
Ralstonia insidiosa
Pathway
rin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACS15_0558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rin03019
]
ACS15_0558
Enzymes [BR:
rin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACS15_0558
Messenger RNA biogenesis [BR:
rin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACS15_0558
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Sacchrp_dh_NADP
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
ANH74986
UniProt:
A0AAC9BIS3
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All DBs
Position
1:561583..563265
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AA seq
560 aa
AA seq
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MSFSELGLSDKLVRAVAELGYTEPTPIQRQAIPAVLKGGDLLAGAQTGTGKTAGFTLPLL
HRLAATQPNKVQTPNGMRFPVRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
ILPPKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGISSLAIHGNKSQSARTRALSEFKANT
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
LLRDIERLIKRELPRTVLEGFEPDPSIAPEPIPNGRNSAGRGGNARGGRPGGGRSQQPRQ
AAGGNAAPREPRAPREPREPRRESSGNGQGQSQNQGQGQGRNGGGNRQRQAQDQRDGQAA
PKPHNGRRGNGAGNGASNGQSQARGQRQGNGQGQGNGQGGQRRSSNTQAAQPAQKAAQPA
KQPFNGLFAKAAALLGGRKA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttccgaactcggcttgtcagacaagctggtacgcgccgtggccgaactcggc
tacaccgaacctaccccgattcaacgccaggccatccccgcagtccttaagggcggtgac
ctgcttgccggtgcacagaccggcaccggcaagaccgccggtttcacgctgccgctgctg
catcgcctcgctgccacgcaaccgaacaaggtgcagacgcccaacggcatgcgcttccct
gttcgcgcgctggtgctcacccccacgcgtgaacttgccgcgcaggtggaagagagcgtg
cgcgcgtacggcaaatacctgccgctgaagtcgatggtgatgttcggcggcgttggcatc
aacccgcagatcgatgcgctcaagcgcggtgtcgatatcgtcgtggccacgccgggccgt
ttgctggaccacgtgggccagcgcaccatcgatctgtcgcacatcgaactgctggtgctg
gatgaagctgaccgcatgctcgacatgggcttcatccacgacatccgcaagatcctcaac
atcctgccgcccaagcgccagaacctgctgttctcggccacgttctcggatgacatccgt
gaattggccgatcgcctgctcgacaagccggcgctgatcgaagtcgcgcgccgcaatacc
acggccgagacggtcgaacagcgcatctacccggtggaccgcgagcgcaagcgcgagctg
ctggccaagctcgtacgcgacaacgactggcaccaggtgctggtcttcacgcgcaccaag
cacggtgcgaaccgcctggccgaacagctcacgcgcgacggcatctcgtcgctggcgatt
cacggcaacaagagccagtcggcacgcacgcgcgcgctgtcggagttcaaggccaatacg
ctgcgtgtgctggtggcgaccgacatcgccgcgcgcggtatcgacatcgaccaattgccg
cacgtcgtcaacttcgacctgccgaacgtgccggaagactatgtgcaccgtatcggccgt
acgggccgcgcgggtgcgcagggcgaggcaatctcgctggtctgcgtggatgagcacggc
ctgctgcgcgacatcgaacgcctgatcaagcgcgaactgccgcgcaccgtgctggaaggt
ttcgagccggacccgagcatcgcgccggagccgattccgaatgggcgcaactcggcgggc
cgtggcggtaatgcgcgtggcggtcgcccgggcggtggtcgcagccagcaaccgcgccaa
gctgcgggcggcaacgctgcaccgcgcgagccacgtgctccgcgtgagccccgcgaacca
cgtcgtgagtcgagcggtaacggtcaaggccagagccagaatcaaggccaaggccagggt
cgcaatggtggcggtaaccgccaacgccaggcgcaagaccaacgcgacggtcaggctgca
ccgaagccgcacaatgggcgtcggggcaatggtgctggcaacggcgccagcaacggccaa
tcgcaagcgcgcggccaacgccagggcaatggccaaggacaaggtaacgggcagggcggt
cagcgtcgttcgtcgaacacgcaagccgcacaaccggcgcagaaggctgcacaaccggcc
aagcaaccgttcaacggtttgtttgccaaagcggcagcactgctcggcggccgcaaagcc
tga
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