Ralstonia insidiosa: ACS15_0968
Help
Entry
ACS15_0968 CDS
T04471
Name
(GenBank) helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rin
Ralstonia insidiosa
Pathway
rin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACS15_0968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rin03019
]
ACS15_0968
Enzymes [BR:
rin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACS15_0968
Messenger RNA biogenesis [BR:
rin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACS15_0968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
P-loop_SecA
HEM4
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANH73100
UniProt:
A0AAC9FRN0
LinkDB
All DBs
Position
1:980221..981702
Genome browser
AA seq
493 aa
AA seq
DB search
MSEASEAPATESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGRDVMGAAQTG
TGKTAGFSLPIIHNLLPDANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRS
AVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDMGF
LPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATAENVRQVIYT
VPDNHKQAALVHLLKQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQT
ERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGAS
GDALSLFAPGDERFLADIEKLIKRNLPREQLTDFDPTGEQARDRERRERDEKRARGEVRR
ARERDERNGARVLDHTIVRPAFRPSDDPFFNRPYESAVPAESADAAKPAQPAGHPRSAKR
PIAALLGGVPRKR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcgtctgaagcaccggccaccgaatcggtgacattcgacagcttcggcctg
catccggacgtccttcgcgcgctgaccgaaagcggctacaccaagcccacgcccatccag
gctgccgccattccggtggtcaccgccggccgcgacgtcatgggcgctgcgcaaacgggt
accggcaagaccgccggcttctcgctgccgatcatccacaacctgttgcccgacgccaat
acgagtgcatcgccggcacgtcacccggtgcgggcgctgattctcacgcccacgcgtgag
ctggccgaccaggtgtacgacaacgtcgccaagtacgcgaagtacacggcgctgcgtagc
gcagtcgtgttcggtggtgtcgacatgaacccgcagaccgagcaactgcgtcgcggcgtg
gaaatccttgtcgccacgccgggccgcctgctcgaccacgtgcagcagcgcagcgtgaac
ctgtcgcaagtgcgcatgctggtgctggacgaagccgaccgcatgctcgacatgggcttc
ctgcccgacctgcagcgcatcatcaacctgctgccggcgcatcgacagacgctgttgttc
tcggccacgttctcgcccgagatcaagaagctggctgccagctacctgcgccatccgcaa
accattgaagtggcacgcagcaacgccacggcagagaacgtccgccaggtcatctacacc
gtgccggacaaccacaagcaggccgcgcttgtgcatctgttgaagcagcgtgcggagcag
ggcctgccgcgccagtgcatcgtgttctccaacagcaagatcggttgctcgcgtctggcg
cgcgcgctggagcgcgaaggcatcaacgccaacgccatccacggcgacaagacgcagacc
gagcggatgcagacgctcgaagccttcaagcagggcaccgttgatgtgctggtcgccact
gacgtggccgcgcgcgggctcgacatctcgcagatgccgtgcgtgatcaactttgatctg
ccgttcaacgcagaagactacgtgcaccgcatcggccgcacgggccgcgccggcgcctcg
ggtgatgcactgtcgctgttcgcgccgggcgacgagcgtttcctggccgacatcgaaaag
ctgatcaagcgcaatctgccgcgcgagcaactgaccgatttcgacccgaccggcgaacag
gcccgtgaccgcgaacgccgcgagcgcgatgaaaagcgtgcccgtggtgaagtccgccgt
gcccgcgagcgcgatgagcgcaatggcgcccgtgtgctggatcacaccatcgtgcgtccg
gcgttccgcccgtcggacgatccgttcttcaatcgtccgtacgaatcggcggtgcctgct
gaatcggcagacgccgccaagccggcacaacccgctggccatccgcgcagcgccaagcgc
ccgatcgcagcgctcctcggtggcgtgccgcgcaagcgctaa
DBGET
integrated database retrieval system
