Ralstonia insidiosa: ACS15_2180
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Entry
ACS15_2180 CDS
T04471
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rin
Ralstonia insidiosa
Pathway
rin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACS15_2180 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rin03021
]
ACS15_2180 (rho)
03019 Messenger RNA biogenesis [BR:
rin03019
]
ACS15_2180 (rho)
Transcription machinery [BR:
rin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACS15_2180 (rho)
Messenger RNA biogenesis [BR:
rin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACS15_2180 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_19
DUF7125
Motif
Other DBs
NCBI-ProteinID:
ANH72562
UniProt:
A0A191ZXA2
LinkDB
All DBs
Position
1:2185317..2186579
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AA seq
420 aa
AA seq
DB search
MHLTELKSLHVSQLLEMAGQLEIDNAQRMRKQELMFAILKKKAKQGETIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
TQPPEAVKNRIMFENLTPLHPNKPLILERDIKAEENITGRIIDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAIATNHPEAELFVLLIDERPEEVTEMQRTVRGEVVASTFDEPAVRHV
QVAEMVIEKAKRLVELKKDVVIVLDSITRLARAYNTVVPTSGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPDILQKVWILRKFIHDMDEVEAMEFLLDKLKSTKNNAEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgacagaactgaaatccctgcacgtgtcccaattgctggaaatggcgggacag
ctggagattgataacgcgcagcgcatgcgcaaacaagagttgatgtttgccatcctgaaa
aagaaggcgaaacagggggaaacgattttcggtgacggcacgctggaagtgctgcccgac
ggcttcggttttctgcgctcgccggaaacgtcgtatctggccagcacggatgacatctac
atcagcccgtcgcagatccgccgtttcaatctgcacaccggcgacacgatcgaaggcgaa
gtccgcaccccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaggtcaac
acgcagcctcccgaggcggtcaagaaccgcatcatgttcgagaacctgacgccgctgcat
ccgaacaagccgctcatcctcgaacgcgacatcaaggccgaagagaacatcaccggccgc
atcatcgacatgatcgccccgatcggccgcggccagcgcgcgctgctggtggcgtcgccc
aagtcgggtaagactgtgatgctgcagcacattgcgcacgccatcgcgaccaatcacccg
gaagccgagctgttcgtgctgctgatcgacgaacgtccggaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgacgttcgatgaaccggccgtgcgccacgtg
caagtggccgaaatggtcatcgaaaaggccaagcgcctggttgaactgaagaaggatgtg
gtgatcgtgctggactcgatcacgcgtctggcacgcgcctacaacaccgtggtgccgacc
tcgggcaaggtgctgaccggtggtgtcgatgccaacgcgctgcagcgcccgaagcgtttc
ttcggtgcggcacgtaacctggaagaaggtggttcgctgaccatcatcggcacggcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgcctggccgagaagcgtgtctaccccgccatcaacctg
aacaagtcgggcacccgccgcgaagagctgctgatcaagccggacatcctgcagaaggtg
tggattctgcgtaagttcatccacgacatggatgaagtcgaggcgatggaattcctgctc
gacaagctcaagtcgaccaagaacaacgccgagttctttgacatgatgcgacgcggcggc
tga
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