Candidatus Riesia pediculicola: RIEPE_0038
Help
Entry
RIEPE_0038 CDS
T01218
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RIEPE_0038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rip03400
]
RIEPE_0038
Enzymes [BR:
rip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
RIEPE_0038
DNA repair and recombination proteins [BR:
rip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RIEPE_0038
Prokaryotic type
RIEPE_0038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
DUF3217
Motif
Other DBs
NCBI-ProteinID:
ADD79757
UniProt:
D4G7L1
LinkDB
All DBs
Position
complement(32194..33297)
Genome browser
AA seq
367 aa
AA seq
DB search
MNDMNDKNEKIFSRRVVQWYLSTKRRSLPWTQNRSIYNVWISEIMLQQTRVSTVIPYYNR
FVKRFPNVQSIVDSNMDEILYYWSGLGYYARARNIYETARRVVKDFKGVFPLDFQTISSF
PGIGRSTAGAILSISENLSFPVLDGNVRRVLIRFFGLKGIKSQIEKELWSIVDRLVPKVD
SRIFNQGMMDLGSEICLPLKSPICQDCPLEKDCFSRNMKLIKPESSIFHDRKNRYLKEKE
VQLLILIKKDRFFLKKVLKGRIWRGLYIFPEFYSTDQLRLFLKKFDLIYPKDQIIKMKPI
LHSFSHIKLKIFPTKITIRKRNDQFSEHIKKHGIWYDMSGKQKIGIPKPIYSLMKEIINF
SNSKKSF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatgaacgataagaatgaaaaaatcttttcaagaagagttgttcaatggtac
ctctccacaaaaaggagatctttgccatggactcaaaatcgatcgatctataacgtatgg
atatctgagattatgttgcaacaaactagggtatccactgtgattccttactataatcga
tttgtgaaaagatttccaaacgttcaatcaatagtcgattcgaatatggacgaaatttta
tattactggtctggattaggttattatgcaagagctagaaatatatatgaaacagcaaga
agagttgttaaagatttcaaaggagtttttccgttagattttcaaacgatttcttcgttt
cctgggataggaagatcaactgctggagcaattttatctatttcagaaaacctatctttt
cctgttttagatggaaatgtaagaagagttttaattcgattcttcggactgaaaggtatt
aaaagtcaaattgaaaaagagttatggagtatcgtagatcgtttagttccaaaagttgat
tccagaatattcaatcagggtatgatggatttaggttctgaaatttgtttaccattgaag
tctcctatctgccaagattgtcctctggaaaaggattgtttctccagaaatatgaaattg
ataaaaccagaatcgtctatttttcatgatagaaaaaatcgctatttaaaggaaaaagaa
gttcaactattaatattgataaaaaaagatcgattcttcttaaagaaagttttaaaaggg
aggatctggcggggattatatatttttccagaattttattcaacagatcaattgagattg
tttttaaaaaagttcgatcttatttatccaaaagatcaaataataaaaatgaaacctatt
ctacatagttttagccacatcaaattaaaaatttttccgacaaaaattacgataagaaaa
agaaatgatcaattttcagaacacataaaaaaacatggaatatggtatgatatgagtggt
aaacagaagattggcattccaaaaccgatatattccttaatgaaggaaatcatcaatttt
tcaaattcaaaaaaatctttctga
DBGET
integrated database retrieval system
