Candidatus Riesia pediculicola: RIEPE_0074
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Entry
RIEPE_0074 CDS
T01218
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rip
Candidatus Riesia pediculicola
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rip03032
]
RIEPE_0074 (gyrA)
03400 DNA repair and recombination proteins [BR:
rip03400
]
RIEPE_0074 (gyrA)
Enzymes [BR:
rip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RIEPE_0074 (gyrA)
DNA replication proteins [BR:
rip03032
]
Prokaryotic type
DNA Topoisomerases
RIEPE_0074 (gyrA)
DNA repair and recombination proteins [BR:
rip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RIEPE_0074 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADD79918
UniProt:
D4G7N6
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All DBs
Position
64051..66588
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AA seq
845 aa
AA seq
DB search
MKNVSKEVSSISIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMKKLGNDYN
SPYKKSARIVGDVIGKYHPHGDGSVYDAIVRLAQPFSMRYALIDGQGNFGSIDGDSAAAM
RYTEIRMSKIAQEILEDLEKNTVDFVPNYDGNEKIPDVMPTKIPNLLINGSSGIAVGMTT
NIPPHNIVEVIDACLAYINDNDIQTEELVKYIRGPDFPTAAIIYEKKEQIVHAYRTGKGT
IQVRALTEIENDKKNNRTSIIIREIPYQINKIRLIEKIVELVKERKIDGIHEVRDESDKD
GMRVVIELKRESEANFVLNSLYALTRLQTSININMIALLKGKPTLLNLKKIISSFIDYRK
EIVIKRTIFELNQAKKRVLSLEAMIISLKNIDFIISLIKGASTPKEARLRLTSFCWKLEE
TLIELDRFYSKKKDWKNCFENHLDRFQKSNYRFNEEQAQTILDLKLQKLTNLEKEKVFEE
YISLTKEITSLVQILQNSNRLMEIIKNELIYIKNQYRDKRRTKIIEDNSKFNQEDLIKKK
KVIVILSNQGYIKFQSISDYDIQKRGGKGKSSTRLKEKDFVKSVLVTDTHENILCVSNFG
RIFSIKVYQLPESSRFSLGKPIVNFLSLKDGEKITSIFSLKNFKKGNYILIATLMGLIKK
ISMDFLTKARKSGIIIINLNKRDEVIAMDSVKKRSEIILFTSSAKAIRFSENSVRLTGRK
SMGVMGVKIQKDEKLVSMIIVEKDKDILTITENGYGNRTKESEYLKKSRFIRGVSVIKND
ERNGKIVGAIQVERKDQVVIFTNYGILIRILVKDISVFKRNTKGIILIRKINDQVVSGIY
RVSSI
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatgtatctaaagaagtatcatcaatcagcattgaagaagaattgaaacgttct
tacttagattacgctatgtctgtgattgttggaagagctcttcctgacgtacgagatggg
ttgaaaccagttcatagaagagttttatatgctatgaagaaacttggaaatgattataac
agcccatataaaaaatcagcgagaatagttggagatgttattgggaagtatcatcctcac
ggagatggatcagtttatgatgcaatagttcgtttagcacaaccattttctatgagatat
gcattaatagatggacagggaaattttggatcgattgatggagattcagctgctgcaatg
cgatatacagaaatcagaatgtcaaaaatagctcaagagattctagaagatcttgaaaaa
aatacggtagattttgttccaaattacgacggaaacgaaaaaattccggatgtaatgcct
actaaaattccgaatctattaattaatggatcatctggaattgcagttggaatgactaca
aacattccaccacataacattgtcgaagttattgacgcttgtcttgcctatattaatgat
aacgacatacaaacagaagaactggtaaaatatattcgaggaccagactttccaacggca
gcaattatatatgaaaaaaaagaacaaatagtacatgcgtatcgaacaggaaaagggaca
attcaagttcgtgcacttactgagatagaaaacgataaaaaaaataatcgaacttctata
ataataagagaaattccttatcaaattaacaaaattagattaattgaaaaaattgtagaa
ctggttaaagaaagaaaaatagatggaattcatgaagtcagagatgagtcagacaaagat
ggaatgagggttgttatagaattaaagagagaatcagaagcaaatttcgtattaaacagc
ttatatgctctaactcgactgcaaacttcgattaatataaatatgatagcccttctaaag
ggaaagccaactcttttaaatttaaaaaaaattatttcttcttttatagattacagaaaa
gaaatagttattaaaagaacgatattcgaactaaaccaagccaagaaaagagttctttcg
ttagaagcaatgatcatttcattaaaaaatattgattttatcatctcgttaatcaaagga
gcaagtactccaaaagaagccagattgcgtttaacatccttctgttggaaattagaagaa
actttaattgagcttgatcgattttattcaaaaaagaaagattggaaaaattgttttgaa
aatcatttagatcgttttcaaaagagtaactatcgatttaatgaagaacaagcacaaacg
atactagatttgaaacttcagaaattaactaatttagagaaagaaaaagtatttgaagag
tatatttctctaacaaaagaaataacgtccttagttcaaatacttcaaaactcgaatcga
ttaatggaaattattaagaacgagttgatatacatcaagaatcaatatcgagataaaaga
agaacaaaaattattgaagataatagtaaattcaatcaagaagatcttattaagaaaaag
aaagtaattgtaattttatcgaaccaaggatatattaagtttcagtcaatttctgattat
gatatacaaaaaagaggaggaaaaggaaaatcttcaactcgattgaaagaaaaagatttt
gtaaaatctgtattagtaactgatactcacgaaaatatactatgtgtttccaattttgga
agaattttttcaatcaaggtttatcaactacctgaatctagtagattttctttaggaaaa
ccgattgtcaacttcttatctctaaaagatggagaaaaaattacttctatattttcattg
aaaaatttcaaaaaaggaaattatatattgatagctactttgatgggactaattaaaaaa
atttcaatggactttttgacaaaagctcgaaaaagcggaattatcataattaacttaaat
aaaagggatgaagtaattgctatggactcagtaaaaaaaagaagtgaaattattctcttt
acttcttctgctaaagcaattcgattctcagaaaactctgttcgtcttacaggaagaaaa
tccatgggcgtgatgggtgtcaagattcaaaaagatgaaaaattagtttccatgataatt
gtagaaaaagacaaagatatcttgacgattactgaaaatggatatggaaatcgaactaaa
gaatctgaatatctaaaaaaatctcgttttattcgtggtgtttcggttattaaaaatgat
gaaagaaatggaaaaatagtaggtgccatacaagtcgaaagaaaagatcaagttgtaata
tttactaattatggaatcttaattagaattttagtaaaagatattagtgtgtttaaaaga
aatactaaaggaattattttaattcgaaaaataaacgatcaagtggtttctggaatttat
cgtgtgtcatcgatttaa
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