Candidatus Riesia pediculicola: RIEPE_0078
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Entry
RIEPE_0078 CDS
T01218
Symbol
miaB
Name
(GenBank) tRNA-I(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rip
Candidatus Riesia pediculicola
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rip03016
]
RIEPE_0078 (miaB)
Enzymes [BR:
rip01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RIEPE_0078 (miaB)
Transfer RNA biogenesis [BR:
rip03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RIEPE_0078 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
DegS
Phage_pRha
Motif
Other DBs
NCBI-ProteinID:
ADD79761
UniProt:
D4G7N9
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All DBs
Position
68687..70024
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AA seq
445 aa
AA seq
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MKTYYKKIYIKTWGCDMNKYDSSKIIDIFFKKKKYSLAKTDTEADIILLNTCSVREKAQE
KVFHQLGRWKKLKKNKIELILCVGGCVASQMNKSILKRAPYVDIIFGPKTIHLLPEMIRS
FEKSRRKIINIDSNFRNEKFQKNHETIRKDISSLISIIEGCNKKCSFCIVPFTRGKEFSR
PLNEILIEIKNLVSEGCREIHLLGQNVNAYRYVQKNGKIYDFSKLIQKISLINGVKRIKF
STNHPNHFTQDVIDLYSTISQLVDYVHIPVQSGSDEILRKMRRPYTIERYKKIIKKIREV
RPDILIGSDFIVGFPGETKEDFLKTIQLVKEIDFDVSFSFMYSSRPGTEASLLRDDTNGH
EKRNRLYFLQNLIERQIIEHNKRMVNQTQKILVLSKDQNDPNKLVGFSNKNRKVIFYGSK
EMIGNLIDVKITHFYKNKLYGRAIE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatactataaaaagatatatataaaaacttggggatgtgatatgaataagtac
gattcctctaaaataattgatatcttttttaagaaaaaaaaatatagtttagctaaaacc
gatacagaagctgatattattttactaaatacctgttcagttcgagagaaagcacaagaa
aaagtttttcatcaacttgggagatggaaaaagcttaaaaaaaataaaatcgaacttatc
ctatgtgtagggggatgcgtagcatctcaaatgaacaaatcgatactaaaacgagctcca
tatgtggatattatttttggtccgaaaacaattcatcttttaccagaaatgattagaagt
ttcgaaaagagtagaagaaagatcattaatatagatagcaattttagaaatgaaaagttt
caaaaaaatcatgaaacaattcggaaagacatctcttctcttatctcaattatagaggga
tgcaataagaaatgttctttttgtattgttccttttactagaggaaaagaatttagtaga
cctctgaatgaaatattaatagaaattaaaaatctcgtttcagaaggatgtcgagaaata
catttacttggacaaaacgtaaatgcgtacagatatgttcaaaaaaacggaaaaatatac
gatttttccaaactgattcaaaaaatttctctaataaatggagtgaagagaattaaattt
tcaacaaatcatccaaatcactttactcaagatgtaattgatttatattcaactatttct
caattggttgattatgttcatattcctgtacaaagtggatctgacgaaattctaagaaaa
atgagaagaccatacaccattgaaagatataaaaaaattataaaaaaaattagagaagtt
agacctgatattttgatcggttcagattttatcgttggatttcctggagaaacaaaagaa
gattttttaaagactattcaattagttaaagaaatagattttgatgttagttttagtttt
atgtactcttctagaccaggaaccgaagcatctttattgagagatgataccaacggacat
gaaaagagaaatcgactgtattttctacaaaacttaatagagagacagattatagagcat
aataagagaatggttaatcaaactcagaaaattttagttttgtctaaagatcaaaatgat
ccaaataaattagtaggcttttccaataagaatagaaaggttatattttatggatccaaa
gaaatgataggaaatctaatagacgtcaaaataacacatttctataagaataaattgtac
ggaagagcaatagaataa
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