Candidatus Riesia pediculicola: RIEPE_0134
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Entry
RIEPE_0134 CDS
T01218
Name
(GenBank) LysM domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RIEPE_0134
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rip01002
]
RIEPE_0134
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rip01011
]
RIEPE_0134
Peptidases and inhibitors [BR:
rip01002
]
Cysteine peptidases
Family C82
RIEPE_0134
Peptidoglycan biosynthesis and degradation proteins [BR:
rip01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RIEPE_0134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
ADD79680
UniProt:
D4G7U2
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All DBs
Position
complement(129393..130352)
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AA seq
319 aa
AA seq
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MIKNYRKFPIFFKIILFFIFYFPTSSLVFARDYLLNPYGGRLIGKIEKYTVPKKKESLED
IMSRFQVGLLGTLRINPKIDVYLPRPGSQIIIPSQMIIPNLKEDEDILINLAELRLYHFL
KKKNIVSVYPVGIGQKEASTPTFEAKIIQMIKKPIWIPTKNIRKRYELEGIKLPEVVPSG
INNPMGMYAMRLSYGKGEYLIHGTNENFGIGSRVTSGCIRLRKEDIKKLFSSVKIGDKVR
VINEPIKYSKEPSGDCYIEVHRPISEDNESKNQRTTSKFYEKDPELKKFLKTNKIEEECF
LKTVLDCSGIPIKLKMSKN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaattacagaaaatttccgatattttttaaaataattttattttttatcttt
tactttcctacttcttctcttgtttttgcaagagattacttattaaatccatatggagga
agattaataggaaaaatagaaaagtataccgttccaaaaaaaaaagaatctctggaagat
attatgagtcgattccaagttggattactaggaacacttcggataaatccaaaaatagat
gtttatctcccgagacctggcagtcaaataattataccgtctcagatgataattcctaat
ttaaaagaagacgaagatatcttaatcaatcttgcagagctaagattgtatcattttctt
aaaaagaagaatatagtttcagtatatccagtaggaattggacaaaaagaagcaagtact
cctacatttgaggctaaaatcattcaaatgattaaaaaaccgatatggattccaaccaag
aatatacgtaagagatatgaacttgagggaataaaacttcctgaggtcgttccttctggt
attaacaaccctatgggtatgtatgctatgagattatcctatggaaaaggagagtattta
attcacggaaccaatgagaattttggaataggttcgagagtaacttctggatgtattaga
ttgagaaaagaagacataaaaaaattatttagttcggttaaaatcggagataaagttaga
gttatcaatgaaccaatcaaatattccaaggaaccaagcggagactgctatattgaagtt
catcgtccaatttcagaagataatgaatctaaaaatcaaagaactacctctaagttttat
gaaaaagatccggaactcaagaagttcttaaaaactaataaaatagaagaagaatgtttt
ttaaaaactgttttagattgttctggaattcctatcaaactaaaaatgtcaaaaaattaa
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