Candidatus Riesia pediculicola: RIEPE_0181
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Entry
RIEPE_0181 CDS
T01218
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip00300
Lysine biosynthesis
rip01100
Metabolic pathways
rip01120
Microbial metabolism in diverse environments
rip01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RIEPE_0181 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rip01002
]
RIEPE_0181 (dapE)
Enzymes [BR:
rip01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RIEPE_0181 (dapE)
Peptidases and inhibitors [BR:
rip01002
]
Metallo peptidases
Family M20
RIEPE_0181 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ADD79542
UniProt:
D4G7Y9
LinkDB
All DBs
Position
complement(179584..180714)
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AA seq
376 aa
AA seq
DB search
MIDQTIKILQKMIKIPSISPNDLGCQEILIGTLKKVGFLVERINFNNVKNFFASHGEKKG
KVLLFVGHTDVVCPGSLKDWRYYPFDPVIKDNSIYGRGTADMKGAIASMILSAKEFVTSF
PDHIGKLAFLITSDEEGSAKYGTKKVVEILKKRKEKIDYCIIGEPTSEFIVGDTIKNGRR
GSLNLNLFLYGPQGHVAYLDPIKNPVNLVVPLLKKLIFRSNMIDKFSKNVSSQIVKISSN
SYGNNITPSQVEIKMNFRFDKEINHDFVKQYISSEIEKHTSSYKLFWKLSAKPFEKKSKE
LIEIINKILIEKFSLFPKLSHSGGTSDGRFIIEICNQIVEIGLINQTIHQPNEMIEIQDL
IRLNTIYLEIMKKILL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcaaactataaagattcttcaaaaaatgattaaaataccatctatcagtcca
aatgatttaggctgtcaagagattttgattggaactctaaaaaaggttggttttttagtt
gaaagaataaattttaacaatgttaaaaatttttttgcttctcatggagagaagaaaggg
aaagttctactatttgttggtcatactgacgtagtatgtcctggttctcttaaagattgg
agatactatcctttcgatcctgtgatcaaagataattcaatttatggaagaggaacagca
gacatgaaaggagccatagcttccatgattttgtctgctaaagaattcgtaacttccttt
ccagatcatattggaaaattagcatttctaatcacttcagatgaagaaggatcagcaaaa
tatggaacaaaaaaagtggttgaaattttaaaaaaaagaaaagaaaaaatagattactgc
atcattggagaacctactagtgagtttatagtcggagataccataaaaaatggtagaaga
ggttctttaaatctgaatttatttctatatggtcctcaaggacatgtcgcatatcttgat
cctataaaaaatccagtcaatcttgtcgtcccacttttaaaaaaattgatttttagatcc
aacatgatagataaattttctaaaaatgtttcttctcaaattgtaaagatttcttccaat
tcttatggaaacaatattactccatctcaagtagaaataaaaatgaactttcgattcgat
aaagagattaatcatgatttcgtcaaacaatatatatcttctgaaattgaaaaacatact
tcttcctataaacttttttggaaactttctgcaaaacccttcgaaaagaaaagtaaagaa
ctgattgaaattattaataaaatattaatagaaaaatttagtttgtttccaaaattatct
cattctggaggaacttctgatggtcgttttattatcgaaatttgtaaccaaatagtagaa
ataggattgataaatcaaacaattcatcaaccgaatgagatgatagaaattcaggatttg
atcagattaaacacaatttatttagaaattatgaagaaaattcttttataa
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