Candidatus Riesia pediculicola: RIEPE_0216
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Entry
RIEPE_0216 CDS
T01218
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03030
DNA replication
rip03430
Mismatch repair
rip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIEPE_0216 (dnaQ)
03430 Mismatch repair
RIEPE_0216 (dnaQ)
03440 Homologous recombination
RIEPE_0216 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rip03032
]
RIEPE_0216 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rip03400
]
RIEPE_0216 (dnaQ)
Enzymes [BR:
rip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIEPE_0216 (dnaQ)
DNA replication proteins [BR:
rip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIEPE_0216 (dnaQ)
DNA repair and recombination proteins [BR:
rip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIEPE_0216 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADD79791
UniProt:
D4G824
LinkDB
All DBs
Position
218613..219362
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AA seq
249 aa
AA seq
DB search
MNVQTERKIILDTETTGMSSSGHPYEGHNIIEIGAVEMINRELTGNLFHVYINPKRSVDP
KAFEIHKISDNFLKDKPTFSEIVDDFVDFIRNSELIIHNASFDVGFINHELSRIEYSFCS
IKKICRITDTLKIARSLFPGKKNSLDALCDRYHIDRSKRSVHSAILDAKILSEIYKLMTG
GQISFNFDHDLEKKENFLNQYYFQRKRKRTRESLVIYANSKEQYCHEFILNTIEKKIGKK
TLWRKNKNF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcaaactgaaagaaaaataattcttgatacagaaaccactggaatgagttca
tctggacatccttatgaaggacataatatcatcgaaattggtgctgtagaaatgattaac
agagagttaactggaaacttatttcacgtctatatcaatcccaaaaggtcggttgatcca
aaagcatttgaaatacacaaaataagtgacaattttctaaaagataaacccactttttct
gaaatagtcgatgacttcgttgattttatccgaaattcagaactaattatccataatgca
tctttcgatgttggttttatcaatcacgaattatctaggatagaatacagtttttgctca
atcaagaaaatatgcaggataacagacactttgaaaatagctagaagtctttttcctgga
aagaaaaatagcttggatgcgttatgtgatagatatcatatagatagatcaaaaagaagt
gtacatagcgcaattctagatgcaaagattttatcagaaatatataaattgatgactgga
ggacaaatttcattcaattttgatcatgatttagaaaaaaaagaaaattttttaaatcaa
tattattttcagagaaaaagaaaaagaacaagagaaagtcttgtgatatatgctaattca
aaggagcaatattgtcatgaatttattttaaatactattgaaaaaaaaattggaaaaaaa
actttatggagaaaaaataaaaatttttaa
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