Candidatus Riesia pediculicola: RIEPE_0230
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Entry
RIEPE_0230 CDS
T01218
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip00020
Citrate cycle (TCA cycle)
rip00190
Oxidative phosphorylation
rip00720
Other carbon fixation pathways
rip01100
Metabolic pathways
rip01110
Biosynthesis of secondary metabolites
rip01120
Microbial metabolism in diverse environments
rip01200
Carbon metabolism
Module
rip_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIEPE_0230 (sdhA)
00650 Butanoate metabolism
RIEPE_0230 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RIEPE_0230 (sdhA)
00720 Other carbon fixation pathways
RIEPE_0230 (sdhA)
Enzymes [BR:
rip01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RIEPE_0230 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADD79408
UniProt:
D4G834
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All DBs
Position
228747..230522
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AA seq
591 aa
AA seq
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MKILKKVFDVIIVGAGGAGMRAALEVSKSGLSCAVITKVFPIRSHTVSAQGGIAASLGNI
HKDNWTWHMYDTVKGSDYLSDQSAVEHLCKNGPKAVLELENMGVPFSRLENGKIYQRSFG
GQTRKFGQKKAFRIASASDRTGHAILHTLFQQNIKNKTVFYSEWYAVDLVKNQDNIVVGC
VAINIKDGEIVYFCSKSTILATGGAGRIYRLTTNSYINTGDGIGMAIRAGFPVQDMEMWQ
FHPTGISEVGILITEGCRGEGGYLINNIEERFMSRYAPKMKDLASRDIISRSILEEIQKN
RGFLNSSGNGFHVKLRVKHLNLIELEKKLPGILELSQIFAGVNPKESDIPVAPTCHYMMG
GIPCNIFGQALTMNSKGEDQVVPGLFVIGEVACMSVHGANRLGGNSLLDLIVFGKTVGKF
VKKFISNYSKTRDANLSDMEVIFDRLSKWNQTGSSSFEDPTRLKERIQKCMENHFYVFRE
KRVMLDGLKKLEEIKERLKRSRIRDHVNFFNLNKVECLEIDNLIETAIATACSAIFRKES
RGAHYRVDYPNRDDQKWLFHTLYFSKENIKKRKINFQTKFCDPFFPKERNY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttaagaaagtattcgatgtaattatagttggagctggaggagctggaatg
cgagctgctttggaagtttccaaatctggactatcttgtgctgtcattacaaaggtgttt
ccaataagatcgcatacagtatctgcccaaggaggaatagctgcatctttaggaaatatt
cacaaagataattggacttggcatatgtacgatacagtcaaaggatcagattatttaagt
gatcaaagtgcagtagaacatctgtgcaaaaacgggcccaaagcggttcttgaattagaa
aatatgggtgttccattctctagattagagaacggaaaaatatatcagagatcttttggc
ggacaaacaagaaaatttggtcaaaaaaaagcttttcgtatcgcttctgcttctgataga
actggacatgctattttacatactcttttccaacaaaatataaaaaataaaactgtattt
tattcagagtggtatgctgtagatttagtgaaaaatcaagataatatcgttgttggatgc
gttgctataaatataaaagatggagagatcgtctatttttgctctaaatcaactatttta
gcaactggaggtgctggaagaatttatcgtttaacaacgaactcatatatcaatacagga
gatgggataggaatggctattagagctggatttcctgtacaggatatggaaatgtggcaa
tttcatccgacaggaatatcggaggttggaatactaatcacggaaggttgtagaggagag
ggaggttatttgatcaataacatagaagaaaggtttatgagtcgatacgctccaaagatg
aaagatcttgcaagcagagacattatatccagatctattttagaagagattcaaaaaaac
agaggttttttaaattcttcaggaaatggatttcatgttaaattaagggtaaaacatcta
aatctgatagaattagagaagaaattgccaggaatattggaattatctcaaatatttgca
ggggttaatcccaaagaatctgatattccagtagctcctacatgtcattatatgatggga
ggaataccttgtaatatttttggtcaagctttgacaatgaatagcaaaggagaagaccaa
gtagttccaggattatttgttattggagaggttgcttgcatgtccgtgcatggtgcaaac
aggttgggaggaaactctcttttggatctgatagttttcggaaaaactgttggaaagttc
gtaaaaaaatttatttcaaattatagcaaaactcgtgatgcaaatctttctgatatggaa
gtcatctttgatcgattaagcaaatggaatcaaactggatcttcttcttttgaagatcca
actagattaaaggaacgtattcaaaaatgtatggaaaatcatttttatgtttttcgagag
aaaagagttatgttagatggattgaaaaagttagaggagatcaaagaaagattaaaaaga
tctcgaataagagatcacgtgaatttttttaatctaaataaagtagaatgtttggaaata
gataatttaatagagacagcaattgctaccgcttgttctgctatatttcgaaaagaaagt
agaggtgcgcattatcgagttgactatcccaacagagatgatcaaaaatggttatttcat
accttatatttttcaaaagaaaacataaaaaaaagaaaaattaattttcaaactaagttt
tgtgatcctttttttccaaaagaaagaaattattga
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