Candidatus Riesia pediculicola: RIEPE_0241
Help
Entry
RIEPE_0241 CDS
T01218
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIEPE_0241 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rip03021
]
RIEPE_0241 (rho)
03019 Messenger RNA biogenesis [BR:
rip03019
]
RIEPE_0241 (rho)
Transcription machinery [BR:
rip03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RIEPE_0241 (rho)
Messenger RNA biogenesis [BR:
rip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RIEPE_0241 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
AAA_25
Mor
Motif
Other DBs
NCBI-ProteinID:
ADD79689
UniProt:
D4G843
LinkDB
All DBs
Position
240419..241678
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNKLVSELIVLGEKIGLENLARMRKQDIIFSILKQHAKSGEDIFGNGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENSRNKILFENLTPLHANIRFRMERGNGSTEDLTARVLDLAAPIGKGQRGLIVAPP
KAGKTILLQNIAANIKSNYSNCVLIVLLIDERPEEVTEMQRLVNGEVIASTFDEPASRHV
QVSEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGIDANALHRPKRF
FGAARNVKEGGSLTIIATALIETGSKMDDVIYEEFKGTGNMELHLSRRISEKRIFPAIDY
NRSGTRKEELLTTKNELQKMWILRRIIHPMDEVDAMEFLINKLSMMKTNREFFEFMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttactgcattaaaaaataaattagtatctgagttaatcgttcttggagaaaaa
ataggattagaaaatttagctagaatgagaaagcaagatattatattctcaatactaaaa
caacatgcaaaaagtggagaagacatctttgggaatggtgtactagaaattttacaagat
ggttttggttttcttcgatcttctgatagttcttatctcgctggaccggatgatatttat
gtttctccaagtcaaattcgaagatttaacttaagaacaggagatactatttctggaaaa
attaggcctccaaaagaaggagaacgatattttgctttattgaaagtcaatgaagtaaat
tttgataaaccggaaaattctagaaataaaatactatttgaaaatctcactcctcttcat
gctaacattagattcagaatggaacgtgggaacggttctactgaagatttaactgctaga
gttttggatttagctgcgccaattggaaaaggtcaaagaggattgattgtagctccacca
aaagcaggaaaaacgatactcttgcaaaatattgctgcaaatattaaaagtaactactca
aattgtgttttaattgtattgttaattgatgagcgtccagaagaagtaacggaaatgcaa
cgtttagtaaatggagaagtaatagcttcaacctttgatgaacccgcttctagacatgtt
caagtatctgaaatggtaatcgaaaaagcaaagagattagtcgagcataaaaaagatgtt
gtaattcttttggattcaattactagattagctagagcgtataacactgttattccttct
tctgggaaagttttaactggaggaattgatgctaatgcattacatcgaccaaagagattt
tttggggctgctcgtaatgtcaaggaaggaggtagtttgacaattattgccacagctcta
atagaaacaggatccaagatggatgatgtgatttatgaggaattcaagggaactggaaat
atggaacttcacttatctagaagaatatcagaaaagagaatttttcctgcaatagactac
aatcgttctggaactagaaaagaagaactattaactaccaaaaatgaactacaaaaaatg
tggatcttgagaagaattattcatcccatggatgaagttgatgcaatggagtttttaatt
aataaattatctatgatgaagactaacagagaattttttgaattcatgaaacgttcttaa
DBGET
integrated database retrieval system
