Candidatus Riesia pediculicola: RIEPE_0250
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Entry
RIEPE_0250 CDS
T01218
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RIEPE_0250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rip03019
]
RIEPE_0250
03009 Ribosome biogenesis [BR:
rip03009
]
RIEPE_0250
Messenger RNA biogenesis [BR:
rip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RIEPE_0250
Ribosome biogenesis [BR:
rip03009
]
Eukaryotic type
Pre-60S particles
RNases
RIEPE_0250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADD79636
UniProt:
D4G848
LinkDB
All DBs
Position
247755..248309
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AA seq
184 aa
AA seq
DB search
MLRDKKNLIWIDLEMTGLNPKRDKIIEIATIITDSQINILSEGPSIVIYQEEKYIEGMDE
WNKNTHTKNGLIQEVKRSLFNEKKAETETIQFLERWIHPGVSPMCGSSINQDRRFLFQYM
PNLEKFFHYRHIDVSTIKELAKRWKPDILENFFRKNFHRALQDIKNSIEELIFYRKHFIK
DFRF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgctacgagataaaaaaaatttaatttggatagatttagaaatgaccggattaaatcca
aaaagagataaaattatagagattgctacaataattactgactctcaaattaatatctta
tctgaaggtccttctattgtcatttatcaagaagagaaatatattgaaggaatggacgag
tggaacaaaaatactcatacaaaaaatggattaatccaagaagtaaaacgtagcttattt
aacgaaaaaaaagcagagaccgaaacaattcaatttctagaaagatggatccatccaggt
gtttctcctatgtgtggaagtagcatcaatcaagatcgaagattcttatttcaatatatg
ccaaatttggaaaaatttttccactatcgacatatagatgtcagcacgataaaagagttg
gcaaaacgttggaaaccagatatattggagaatttctttagaaaaaactttcatagagca
ttacaagacataaaaaattccatcgaagaattaattttctatcgaaaacattttattaaa
gattttcgtttctaa
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