Candidatus Riesia pediculicola: RIEPE_0315
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Entry
RIEPE_0315 CDS
T01218
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIEPE_0315 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rip03019
]
RIEPE_0315 (groL)
03110 Chaperones and folding catalysts [BR:
rip03110
]
RIEPE_0315 (groL)
03029 Mitochondrial biogenesis [BR:
rip03029
]
RIEPE_0315 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rip04147
]
RIEPE_0315 (groL)
Enzymes [BR:
rip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RIEPE_0315 (groL)
Messenger RNA biogenesis [BR:
rip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RIEPE_0315 (groL)
Chaperones and folding catalysts [BR:
rip03110
]
Heat shock proteins
HSP60 / Chaperonin
RIEPE_0315 (groL)
Mitochondrial biogenesis [BR:
rip03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RIEPE_0315 (groL)
Exosome [BR:
rip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RIEPE_0315 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RIEPE_0315 (groL)
Exosomal proteins of breast cancer cells
RIEPE_0315 (groL)
Exosomal proteins of colorectal cancer cells
RIEPE_0315 (groL)
Exosomal proteins of bladder cancer cells
RIEPE_0315 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
ADD79539
UniProt:
D4G8A9
LinkDB
All DBs
Position
309134..310771
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGSEARAKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVSEGLKAVAAGMNPMDLKRGI
DKAVSAAVEELKKLSKTCDDNKAIEQVGTISANSDQSVGKLIADAMEKVGKEGVITVEEG
SGLEDQLAVVEGMQFDRGYLSPYFINKTDSGSAELENPYILLVDKKISNIRELLPVLESV
AKSSKPLLIIAEDVEGEALATLVVNNLRGIVKVAAVKAPGFGDRRKAMLQDIAILTNSMV
ISEEIGMELEKASIEHLGQAKRVVINKDTTTIIDGIGERSSIRNRVKQIMQQRDEATSDY
DREKLQERIAKLSGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGIALV
RVATKLDLLNGENEDQTVGIRIALRAMESPMRQIVENSGGEAAVVVNNVKKGKNNYGYNA
STEQYGDMMEMGILDPTKVTRSALQFAASIAGLMITTEAMITDLPKEDKSEMNPSSGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtagtgaagctcgtgcaaaaatgctaagaggtgtg
aatatacttgcagatgcagtaaaggtaactttaggtcctaaaggaaggaatgtggttctt
gataaatcttttggagcaccttctataacaaaagacggagtttctgttgctagagagata
gaactagaagataaatttgagaacatgggagctcaaatggtaaaagaagttgcttctaaa
gcaaacgacgctgctggagacggtacgaccacagcgaccgttttagcacaatctattgtc
agtgaaggattaaaagcagtagcggctggaatgaatccgatggatctaaagagaggaata
gataaggcagtttctgcggcagtagaagagttgaaaaagctttctaaaacttgtgacgat
aataaagcaatcgaacaagttggaacaatctctgctaactctgatcagtcagtgggaaaa
ttgatagctgatgcaatggaaaaagttggaaaagagggcgttatcactgtagaggaaggc
tctggattagaagatcaacttgcagttgtcgaagggatgcaatttgatagaggttatctg
tctccttattttattaataagacagattctggttctgcagaattagagaatccctatata
cttcttgtagacaaaaagatatccaatattagagagcttttgcctgtattagaaagtgtt
gcaaaatctagtaaaccgcttttgattattgcagaagatgtggaaggagaagctttagca
actctagttgtaaataatttgagaggaattgtgaaggtagctgctgttaaggctcctggt
tttggagatagaagaaaagctatgcttcaagatattgctattctaacaaacagtatggta
atttctgaagaaattggaatggagttagaaaaagcttctattgaacatcttggtcaagcc
aagagagttgtaataaataaagatactacaacaataatagatggaattggagagaggagt
tctataagaaatagagttaaacagataatgcaacaaagagacgaagctacttcggattat
gatagagaaaaacttcaagaaagaatagcaaaattatctggaggagttgctgtcatcaaa
gtgggagctgcaacagaagttgagatgaaagaaaagagagcgagagtagacgatgcgtta
catgctactcgagctgcagtggaagaaggagtggtagctggaggaggtattgctttagta
agagttgctacaaaacttgatcttctaaatggagagaacgaagatcaaactgttggaatt
agaattgccttgagagctatggaatctccaatgagacagattgtagaaaattctggagga
gaagctgctgtagttgttaacaatgttaaaaaaggaaaaaataattatggatacaatgct
tctacagaacagtacggggatatgatggagatgggaattttagatccaacaaaagtaacc
agatccgctctacaatttgccgcttctatagccggactaatgattacgactgaagctatg
attactgatcttccaaaagaggataaatcagaaatgaatccttcttctggaatgggaggt
atgggtggaatgatgtaa
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