Candidatus Riesia pediculicola: RIEPE_0320
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Entry
RIEPE_0320 CDS
T01218
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RIEPE_0320 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rip03400
]
RIEPE_0320 (ung)
Enzymes [BR:
rip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RIEPE_0320 (ung)
DNA repair and recombination proteins [BR:
rip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RIEPE_0320 (ung)
Prokaryotic type
RIEPE_0320 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
ADD79836
UniProt:
D4G8B4
LinkDB
All DBs
Position
complement(314476..315180)
Genome browser
AA seq
234 aa
AA seq
DB search
MKNKRKKIEFSWKKFILEESKKKYFLNILHQLNEARKSGKEVYPKDEDIFNAFYYTEFHK
IKLVILGQDPYHCPNQSHGLCFSVPPKIEIPPSLRNIYKELEENVKSFKIPNHGCLTRWT
KQGIFLLNSILTVERGKPLSHKNIGWQIFTNKAISKISLLKEGVIFLLWGNFAKSKKNLI
NRNKHYVLESTHPSPFSANFGFFGCKHFLKANQILKKNNIKLIDWSLPLDFTFF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaagaaaaaaaattgaattcagctggaaaaaatttattttagaagaaagt
aaaaaaaagtacttcttaaatattcttcatcaattaaacgaagcaagaaaatctggaaaa
gaagtgtatccaaaagatgaggatatttttaacgcattttattatactgagtttcataaa
attaaattggtaattctaggacaagatccttaccattgtcctaatcaatctcatggatta
tgtttttctgttcctccaaaaatagaaatccctccttctttaagaaacatttacaaagaa
ctagaagaaaatgttaaaagtttcaaaatacccaatcatggttgtttaactagatggact
aaacaaggaatattcttattaaatagcatactgacagttgaaagaggaaagcctctctct
cataagaatatcggttggcaaattttcacaaataaagcaatttccaaaattagtctttta
aaagaaggagtaatatttttactatggggaaattttgccaaaagcaagaaaaacctaata
aatcgaaataagcattatgttcttgaatctactcatccttctccattttctgcaaatttt
ggttttttcggatgtaaacatttcttgaaagccaatcaaattttaaaaaaaaataacata
aaactgattgattggagtttaccattagattttacctttttttaa
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