Candidatus Riesia pediculicola: RIEPE_0324
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Entry
RIEPE_0324 CDS
T01218
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RIEPE_0324 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rip03019
]
RIEPE_0324 (rnc)
03009 Ribosome biogenesis [BR:
rip03009
]
RIEPE_0324 (rnc)
03036 Chromosome and associated proteins [BR:
rip03036
]
RIEPE_0324 (rnc)
Enzymes [BR:
rip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RIEPE_0324 (rnc)
Messenger RNA biogenesis [BR:
rip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RIEPE_0324 (rnc)
Ribosome biogenesis [BR:
rip03009
]
Eukaryotic type
90S particles
RNase
RIEPE_0324 (rnc)
Prokaryotic type
rRNA processing factors
RIEPE_0324 (rnc)
Chromosome and associated proteins [BR:
rip03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RIEPE_0324 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
TMEM232
DSRM_REH2
Motif
Other DBs
NCBI-ProteinID:
ADD79622
UniProt:
D4G8B7
LinkDB
All DBs
Position
318249..318932
Genome browser
AA seq
227 aa
AA seq
DB search
MLQKNIGYRFNHLDFLYQSLTHRSTNLSHNERLEFLGDSILNLIISKFLYDEFLSKNEGE
MSRTRSNLVKEGTLSDIANQLGIGSFINLGLGEIKNHGFLKRSILSNALEAIIGAIFLDS
GSNIKTIENVIMNWYRNHADLINLSRDEKDPKTKLQEHLQKFHLPLPKYELLKSVGYDHE
KQFTIVCKVFGFRKSDHFITIGTGKKYKEAEKLAAKHMFDKIVNYHF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaagaatatcggatatcgattcaaccatttagattttttatatcaatcatta
actcatcgaagtacgaatctgtctcataatgaaaggttagaatttttaggtgactccata
ttaaatctaattatctcaaaatttctctacgatgaatttctctcgaagaatgaaggagaa
atgagtagaacgagatctaatttggtcaaagaaggtacactatcagatattgctaatcaa
ttaggaataggaagtttcataaatttagggttgggagaaattaaaaatcatggtttttta
aaaagatcgatactttcaaatgctttagaagccatcataggagccatatttttggatagt
ggtagtaatataaaaacaatagaaaatgttataatgaactggtatcgtaaccatgcagat
ctcatcaatctttcgagagatgaaaaagatccaaaaactaaattgcaagaacatttacag
aagtttcatttaccattgccgaaatatgaactcttaaagagtgtagggtacgatcatgaa
aaacaatttacaatcgtttgtaaagtttttggatttcggaaatctgatcatttcatcact
attgggactggaaaaaaatacaaagaagcagaaaaactagcagcaaaacacatgttcgat
aagattgtaaattatcatttttaa
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