Candidatus Riesia pediculicola: RIEPE_0483
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Entry
RIEPE_0483 CDS
T01218
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip00470
D-Amino acid metabolism
rip00550
Peptidoglycan biosynthesis
rip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RIEPE_0483 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RIEPE_0483 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rip01011
]
RIEPE_0483 (murD)
Enzymes [BR:
rip01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RIEPE_0483 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rip01011
]
Precursor biosynthesis
Amino acid ligase
RIEPE_0483 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ADD79580
UniProt:
D4G8R3
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All DBs
Position
complement(458224..459543)
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AA seq
439 aa
AA seq
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MVNYFGKKVVIIGLGKTGLSCINFFLSKKIFPKVIDTQYPSYTKHSIPEGVIYHFGSWNR
GWIVSSDLIVLSPGVSRLHEEIQIAYRKGIEIIGDIELFCREVDRDKKIISITGSNGKST
TASVLTEIAKKANLKVGLGGNIGVPVLELLNYDYDIYILELSSFQLEITSTLKSIGAVIL
NISENHMDRYPFGMYQYLSAKLKIYDFAKNCVINIMDNRIWPKEIDKRNFLSFGINSGDY
RLNTKKNTIQRFEKDLIHIKFIKIIGQHNHMNFLATLCLSEIIGIPINISLFVISRYSGL
PHRLQVVHKKNGVIWINDSKSTNIESTIAALKSIKANNKIHLLLGGDKRKSKISRLKEFV
SYKKKIRIYCFGKDKLKFGKLRNDSIVLNTLEQCMLKVSKNTESGDIILLSPACSSLDQF
SNFEHRGSVFSEIAKKLGS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggtaaattattttggaaaaaaagtagttattattggattaggaaaaactggtttatct
tgtattaatttcttcttatctaaaaaaatattcccaaaagtcattgatactcaatatcct
tcatatacgaaacattccattcctgaaggagttatttatcattttgggagttggaatcga
ggatggattgttagttctgatctaattgtcttaagtccaggagtaagtcgattacacgaa
gaaatacaaatagcatatagaaaaggaatcgagataataggagatattgaacttttttgt
agagaagtggaccgagataaaaagatcatttctatcactggttcaaacgggaaaagtaca
acagcttctgttttgacggaaatagctaagaaagctaatttaaaagttgggctcggtgga
aatataggagttcctgtactggaattattgaattacgattatgatatatatatcttagaa
ttgtccagttttcaattggaaattacgagtactcttaaatctattggagctgttattttg
aacatctcagaaaatcatatggatcgatatccattcggaatgtatcaatacctttcagca
aagctaaaaatttatgattttgcaaaaaattgtgttatcaatatcatggataatcgaata
tggccaaaagaaatcgataaaagaaattttttgagttttggaattaattctggtgattac
cggttaaacacaaaaaagaatacaattcaaagatttgaaaaagatttgattcatataaaa
tttatcaaaattattggacagcacaatcatatgaattttctagcaacactttgtctttca
gaaattatcggaattccaatcaatataagtctctttgttatatctcgatattcaggttta
ccacatagattacaagtggttcacaaaaaaaatggagttatatggatcaatgattcaaaa
tcaaccaatatagaaagtacaattgccgctctgaagagcataaaagcaaataataagata
catttgctattagggggtgataaaagaaagtcaaagatatctcgtttaaaggaattcgta
tcttacaaaaaaaagatacggatatattgttttggaaaagacaagttaaagttcggaaaa
ttgagaaacgatagtatcgtattaaatacgttagaacagtgcatgttaaaagtttcaaag
aatactgaatcaggagatattatattgttatccccagcttgctccagtttggatcaattc
tctaacttcgaacatcgaggatcagttttttcagaaatagctaaaaaattgggttcttaa
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