Agrobacterium pusense IRBG74: BN877_I0410
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Entry
BN877_I0410 CDS
T02867
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00061
Fatty acid biosynthesis
rir00071
Fatty acid degradation
rir01100
Metabolic pathways
rir01212
Fatty acid metabolism
rir02024
Quorum sensing
rir04146
Peroxisome
Module
rir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BN877_I0410 (fadD)
00071 Fatty acid degradation
BN877_I0410 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BN877_I0410 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN877_I0410 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rir01004
]
BN877_I0410 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rir04147
]
BN877_I0410 (fadD)
Enzymes [BR:
rir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BN877_I0410 (fadD)
Lipid biosynthesis proteins [BR:
rir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BN877_I0410 (fadD)
Exosome [BR:
rir04147
]
Exosomal proteins
Exosomal proteins of breast milk
BN877_I0410 (fadD)
Exosomal proteins of breast cancer cells
BN877_I0410 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CDI07325
UniProt:
U4Q474
LinkDB
All DBs
Position
complement(399784..401496)
Genome browser
AA seq
570 aa
AA seq
DB search
MSELSLGHPQNAVIGKRWLSSYPPGVPSEIPVSTNASLVDLLQKSCVQFADRKAFSSMGK
SLTYRELDAETRAVAAWLQSRGLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLY
TPRELEHQLKDSGAKALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGLKGHIVNLVVR
KVKKLVPAYTIPGSISFTAMLKEGQGFSLKPVSLTAQDVAFLQYTGGTTGVSKGAVLTHA
NLLANKLQISLWLDAAFNGQKDRPEVLNFICALPLCHIFALTVNSLMGIALGGHNLLIAN
PRDIPGFVKELSHYQPHIFPGINTLFNALMNNEDFRKLDLSSLILVLGGGMAVQRPVAER
WLSIVGCPIAEGYGLSETSPVATVNRLDSTEFSGTIGLPISSTEIDIRDEDGNSLPTGEV
GEICIRGPQVMAGYWQRPDETAKAMTSDGFFRSGDMGFMDERGYTKIVDRKKDMILVSGF
NVYPNEVEEVAASHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTN
YKRPKIIEFRTELPKSNVGKILRRELRNLN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgtccctgggacacccgcagaacgccgtcattgggaagcgctggctgtct
tcctatccgccgggcgttccttccgaaattcccgtatcgaccaatgcctccctcgtcgat
cttctccaaaagagctgtgtgcagtttgccgaccggaaggccttttccagcatgggaaag
tcgctgacctaccgggaactggacgctgaaacccgagccgtcgccgcctggctgcagtcc
agaggactggaaaagggcgaccgggttgccgtgatgatgccgaacatcctccaaaatccg
gttgcggtttatggaatcctgcgggcaggcatggtggtggtcaatgtcaatccgctctac
acaccgcgcgagctggaacatcagctgaaggattccggcgcaaaggcgctttttgtgctg
gagaactttgcacatgtggcgcagcaggcggtgccgaaaaccgcggtgcggcacgtggtc
gtcgcggcgatgggcgatcttctcggcctcaagggacatatcgtcaatctggtggtccgc
aaggtcaagaaactggtgcccgcctataccatccccggctccatcagcttcacggcgatg
ctgaaggaaggtcagggattttcgctgaagccggtcagcctcacggcgcaggacgttgct
ttcctgcaatataccgggggcacgacgggtgtatccaagggtgcggttctcacgcatgcc
aaccttctggccaacaagcttcagatcagcctgtggctggacgccgccttcaacggccag
aaggatcgcccggaagttctcaacttcatctgcgcgctgccgctctgccacatcttcgcc
ttgacggtgaattcgctgatgggcattgcgcttggcggccacaatctgctgattgccaat
ccgcgcgatattcccggttttgtgaaagaattgtcgcattatcagccgcatattttcccc
ggcatcaatacgcttttcaacgcgctgatgaacaacgaggatttccgcaagctcgatctg
tcgtcgctcattctggttctcggcggcggcatggcggtgcaaaggcctgtcgcggaacgc
tggctttccatcgtcggctgccccattgcggagggttacggcctctccgagacatcgccg
gttgccaccgtcaaccgcctcgattccacggagttcagcggaaccatcggcctgccgatc
tcttccaccgaaatcgatattcgcgacgaggacggcaacagcctgcccaccggagaggtc
ggagaaatctgcattcgtgggccgcaggtgatggcgggttattggcagcggccggacgag
acggcaaaggcgatgacatcagacggcttcttccgttccggcgacatgggcttcatggat
gaacgcggttataccaagatcgtcgaccgcaagaaggacatgatcctcgtctccggcttc
aacgtctatccgaacgaggtggaggaagtggccgccagccatccaggcgtcctggaatgc
gccgccatcggcgttccggacgagcactccggcgaaaccgtcaagctttttgtggtcaag
aaggaccagtcgctcacggaagcggaactcaaggcgttttgcgccaagaacctgacaaac
tacaagcggccgaagatcatcgagttccgtaccgagctgccgaaatcgaatgtcggcaag
atcctgcggcgcgaattgcgcaatctgaactga
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