Agrobacterium pusense IRBG74: BN877_I0480
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Entry
BN877_I0480 CDS
T02867
Symbol
fadB
Name
(GenBank) bifunctional anaerobic fatty acid oxidation complex protein: enoyl-CoA hydratase/epimerase/isomerase; 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00071
Fatty acid degradation
rir00280
Valine, leucine and isoleucine degradation
rir00310
Lysine degradation
rir00362
Benzoate degradation
rir00380
Tryptophan metabolism
rir00410
beta-Alanine metabolism
rir00640
Propanoate metabolism
rir00650
Butanoate metabolism
rir00907
Pinene, camphor and geraniol degradation
rir00930
Caprolactam degradation
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01120
Microbial metabolism in diverse environments
rir01200
Carbon metabolism
rir01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BN877_I0480 (fadB)
00650 Butanoate metabolism
BN877_I0480 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
BN877_I0480 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BN877_I0480 (fadB)
00310 Lysine degradation
BN877_I0480 (fadB)
00380 Tryptophan metabolism
BN877_I0480 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BN877_I0480 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BN877_I0480 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BN877_I0480 (fadB)
00930 Caprolactam degradation
BN877_I0480 (fadB)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BN877_I0480 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BN877_I0480 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BN877_I0480 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
2-Hacid_dh_C
GIDA
FAD_binding_3
Pyr_redox
NAD_binding_8
F420_oxidored
ThiF
Pyr_redox_2
ApbA
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
NAD_binding_7
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
CDI07395
UniProt:
U4Q4F8
LinkDB
All DBs
Position
474804..477020
Genome browser
AA seq
738 aa
AA seq
DB search
MSTYTNFTIETDADGIALVTWDMPEKSMNVFTSEVMDELNAILDATVADSAVKGVVFTSG
KSTFSGGADLSMIKSMFSFYNDEKTKNPDQAAAKLFELVGRMTGLFRKIETNGKPWVSAI
NGTCMGGAFELSLACHGRVASIAKNLKIALPEVKVGIFPGAGGTQRVSRLTDAQSALQMM
TTGQSLTGARAKAMGLVHQVVEPDQLVATAKQMIKDGLKPVAPWDEKGFKAPGGGIWTPA
AAQLWPAAPAILRRESAGNYPAALAILKCVYEGLQLPFDTALKVEQRYFTEILRSKEAFG
MIRSLFISMQELGKGARRPAGQPKTEFKKVGVVGAGFMGAAVAYVTAAAGIPVTLVDRDQ
EAADKGKGHCEESVKAAIGKGRLTQDEGKALLDLVTPTADYTALSDVDLVIEAVFEDRDV
KKAVIEAVEAVLPEGAIFASNTSTLPITGLAKNSKRPTDFIGIHFFSPVEKMMLTEVILG
KETGDKALAVALDYVAKIKKTPIVVNDTRGFFVNRCVLRYMAESYDMLIEGVPPAMIENA
AKFAGMPVGPLALNDEVAIDLSYKILKATVADLGEKAVDPRHMELVKKLVEGEGRFGRKN
AKGFYDYPPKPAKKSLWPGLKDLYPQQKPEDVDMEVLKQRFLVTVALEAARTVEEGIVTD
PREADVGSILGFGFAPYTGGALSYIDGMGVKSFVALAEKLSETYGPRFQPTPLLKDMAAK
GETFYGRFDPYASAAKAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttacaccaatttcaccatcgagacggacgcagacggcattgccctcgtcacc
tgggacatgccggaaaagtccatgaacgtcttcacgtcagaggtgatggacgagctgaac
gccattctcgacgccaccgtcgccgatagcgccgtcaagggcgtcgtcttcacgtcgggc
aaaagtaccttttccggcggcgccgatctgtcgatgatcaagtcgatgttctccttctac
aatgacgagaagacgaagaacccggatcaggcggcagcaaagctgttcgagctggtgggc
cgcatgaccggcctgttccgcaagatcgagaccaacggcaagccctgggtctccgccatc
aacggcacctgcatggggggcgctttcgaactgtcactcgcctgccacggccgcgtggcc
tccatcgccaagaacctcaagatcgcactgccggaagtcaaggtcggcatcttcccgggc
gctggcggcacccagcgcgtctcgcgcctgaccgatgcacaatctgccttgcagatgatg
acgacaggccagtcgctgaccggcgcacgcgccaaggccatggggctggtgcaccaggta
gtcgagccggatcagctggtcgcaactgcaaagcagatgatcaaggacggcctgaagccg
gtagcaccctgggatgagaagggcttcaaggcccccggcggcggcatctggacgcctgcg
gctgcccagctgtggcccgccgctccggcgatcctgcgccgcgaaagcgccggcaactat
ccggccgcactcgccatcctcaaatgcgtttatgaagggctgcaattgcctttcgatacg
gcgctgaaggtggagcagcgttatttcaccgaaatccttcgctcgaaggaagccttcggc
atgatccgctcgctgttcatttccatgcaggagctgggcaagggcgcgcgccgtccggcc
ggccagccgaagacggagttcaaaaaggttggcgtcgtcggcgcgggcttcatgggggcg
gcggtcgcttacgtcaccgccgcagcgggtattcccgtcacgctggtggatcgcgatcag
gaagccgcagacaagggcaagggccattgcgaggaaagcgtcaaggccgccatcggcaag
ggtaggctgacgcaggatgaaggcaaggccttgcttgatctcgtcactcccacggcggat
tacactgcattgtctgatgtcgatctcgttatcgaggccgtctttgaagaccgcgacgtg
aagaaagccgtcatcgaagccgtggaagccgttttgcccgaaggcgcaatctttgcctcc
aacacgtccaccttgccaatcacggggctggcaaagaactccaagcgtccgaccgatttc
atcggcatccacttcttctcgccggtcgagaagatgatgctgacggaagtcatcttgggc
aaggaaaccggcgataaggcgctcgccgtcgcgctggattatgtggccaagatcaagaag
accccgatcgtcgtcaacgatacgcgcggcttcttcgtcaatcgttgcgtgctgcgctac
atggccgaaagctacgacatgctgatcgaaggcgtgccgcccgcgatgatcgaaaatgcc
gcgaaattcgccggcatgccggtcggcccgctggcgttgaacgacgaagtggccatcgat
ctttcctacaagatcctgaaagccaccgtcgccgatctcggcgaaaaggcggtcgatccg
cgccatatggagctggtgaagaagctggtggaaggcgagggccgctttggccgtaagaac
gccaagggcttttacgactacccgccaaagcccgccaagaagtccctctggcctggcctg
aaggacctctatccgcagcagaagcctgaagacgtggatatggaggtgctgaagcagcgc
ttcctcgtcaccgtggcgctggaagccgcccgcacggtggaagagggcatcgtcaccgat
ccgcgtgaggcggatgtcggttccatcctcggtttcggcttcgcgccctataccgggggc
gcgctgtcctacattgacggcatgggcgtgaagagcttcgtcgcgctcgccgaaaagctc
agcgagacatacggaccgcgcttccagccaacgccgctgctgaaggatatggccgccaag
ggcgagaccttctacggtcgcttcgatccctatgccagcgccgcgaaggcggcctga
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