Agrobacterium pusense IRBG74: BN877_I0671
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Entry
BN877_I0671 CDS
T02867
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00540
Lipopolysaccharide biosynthesis
rir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BN877_I0671 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rir01005
]
BN877_I0671 (kdtA)
Enzymes [BR:
rir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BN877_I0671 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BN877_I0671 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
BN877_I0671 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
BN877_I0671 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
rir01005
]
Lipid A
BN877_I0671 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
CDI07585
UniProt:
U4Q4X3
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All DBs
Position
676789..678111
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AA seq
440 aa
AA seq
DB search
MSSRIARFALSGYRIAGIAAYPFAKPYLSYRAAKGKEDKRRRLERFGYASAERPRGPLVW
FHAASVGETLALIPLIREIRKRDIFVLLTTGTVTSAELTRTRLGDDVIHQYVPLDIKIAV
NRFLTYWAPDAAITAESEIWPVTMMELERRHIPQIRVNARLSDRSFDRWKARHDIAESLF
SKLALVVAQSDLDAERFRDLGSWPVVISGNLKGDTDPPPCDEALLESYRKQVGNRKTWAA
ISTFDGEEKAAATVHAAIKSRNGQLTIIVPRHPERGDEVEAMLKGMNLSVARRSRNDVIT
PETDIFLGDSIGEMGLYLRLTELAFVGRSLTAEGGQNPLEPAMLGCAVLSGAHVQNFREA
YQKLIRAGGGRIIRDVEMLAKAVHYLLVNDNERYKMIDAGNRVIQDMRGALSSTVKALEP
YINPLTVSAKLQPRSAIGSW
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgtatcgcacgtttcgctctttccggttaccgcattgccggtatcgccgct
tacccgtttgccaagccctatctttcctatcgggccgccaagggcaaggaagacaaacgc
cgccggctcgaacgtttcggttatgcgagtgccgagcgcccgcgtgggccgctcgtctgg
ttccacgccgcaagtgtcggcgaaacgctggcgcttattccgctcatccgcgaaatccgc
aaacgcgacatcttcgtgcttctgaccacgggtacggtcacctcggccgaactgacccgc
acccggctcggcgatgacgtgatccaccaatatgtgccgctcgacatcaagatcgcggtc
aaccgtttcctgacctactgggcacccgatgccgccatcacggccgagtccgaaatctgg
ccggtgacgatgatggaactggagcgtcggcacattccgcagatccgggtcaatgcacgc
ctttccgaccgttccttcgatcgctggaaagctcgccacgacattgctgaatcgctgttt
tccaagctggcgctggtggttgcccaatccgatctcgatgccgaacgtttccgcgatctc
ggttcctggccggtggtgatatcgggtaacctcaagggtgacaccgacccgccgccctgt
gacgaggcgctgctggagagctaccgcaagcaggtcggcaatcgcaagacatgggcggcg
atctcaacctttgacggtgaggagaaggccgcggccaccgtgcatgcggcgatcaagtcg
cgcaacgggcaactgaccatcatcgtgccgcgccatcccgagcgtggagatgaggtggag
gccatgctgaagggcatgaatctctccgttgctcgccgcagccgcaatgatgtgataacg
cctgaaaccgatattttcctcggggactccattggggaaatggggctttacctgcggctg
accgagcttgcctttgttggccgctcgctgacggccgaaggcgggcagaacccgctggag
cctgccatgcttggctgtgcggttttgtcgggcgcgcatgtgcagaacttccgcgaggcc
tatcagaagctgatccgcgcaggtggtggccgcatcatccgtgatgtggagatgctggca
aaggcggtgcattatctgctggtcaacgataatgagcgctacaagatgatcgatgcgggc
aatcgggtcattcaggatatgcgcggcgcgctgtcctccacggtgaaggcgctggagccc
tatatcaacccgctcaccgtttccgccaagctgcagccgcggagcgccatcggatcatgg
tag
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