Agrobacterium pusense IRBG74: BN877_I1015
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Entry
BN877_I1015 CDS
T02867
Symbol
rpoZ
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN877_I1015 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rir03021
]
BN877_I1015 (rpoZ)
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_I1015 (rpoZ)
Enzymes [BR:
rir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN877_I1015 (rpoZ)
Transcription machinery [BR:
rir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN877_I1015 (rpoZ)
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN877_I1015 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
LamB_YcsF
MinE
Motif
Other DBs
NCBI-ProteinID:
CDI07928
UniProt:
U4PS26
LinkDB
All DBs
Position
997999..998451
Genome browser
AA seq
150 aa
AA seq
DB search
MCILKPHGALIHDITTRKGQAMARVTVEDCIDKVDNRFELVLLASHRARQISQGSSITVD
RDNDKNPVVALREIADETLSPDDLKEDLIHSLQKHVEVDEPEPDPVTLAAAAADSEEDDQ
PETVTFDQMSEEELLAGIEGLVPPEKNDDY
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcatcctgaaaccgcacggcgctctgatccacgacattacgacccgcaaaggacag
gcaatggcccgcgtcacagttgaagattgcattgataaagtagacaaccgtttcgagctg
gtgcttctcgccagccaccgtgcgcgccagatttctcagggctcttccatcacggttgac
cgcgataatgacaagaaccccgtcgttgcgctgcgtgaaatcgccgacgagacgctgtct
cccgacgatctgaaggaagaccttatccattcgctgcagaagcacgtggaagtggacgag
cccgagcccgatccggtcacgcttgccgccgccgctgccgacagcgaagaagacgaccag
ccggagaccgtcaccttcgaccagatgtcggaagaagaactgctggccggtatcgaaggc
cttgtgccgccggaaaaaaatgacgactattga
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