Agrobacterium pusense IRBG74: BN877_I1159
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Entry
BN877_I1159 CDS
T02867
Name
(GenBank) putative amidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rir
Agrobacterium pusense IRBG74
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rir01002
]
BN877_I1159
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rir01011
]
BN877_I1159
Peptidases and inhibitors [BR:
rir01002
]
Cysteine peptidases
Family C82
BN877_I1159
Peptidoglycan biosynthesis and degradation proteins [BR:
rir01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BN877_I1159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CDI08069
UniProt:
U4Q2Z3
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All DBs
Position
1134601..1135932
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AA seq
443 aa
AA seq
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MTKTSVSNSVSRRTLLRSAVSAGVAALAAPALAQDALNDLMGSSRRGNWDDQFDANTSRS
AVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPEVPASQQRLQIGVSDPSVQALRQR
LMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPADGVSGEYTTKALNVSAQIRLAQLQ
TNLVRIQSMSGDLGQRHLMVNIPAAAIEAVENERVVLRNTAVVGRASRPTHVINSKIYEV
ILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLIDGKGQEVSPTTVDWFAPKAPNLMF
RQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTSWLLR
DTPGWSRQEMERVIASRVNTPIKLAQEVPVYFVYITAWSAKDGVVQFRDDIYGKDGNAEL
ALNTTAGMEQPAGAVDDDLLPRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacatccgtttccaattccgtatcgcgccgcacgcttctgcgctcggccgtt
tccgctggtgtcgccgcgctcgctgcgccggccttggcgcaggacgcgcttaacgatctc
atgggttcctcgcgccgcggcaactgggatgaccagttcgacgccaatacgtcgcgttcg
gctgtgggcgtcgtttccaacaatccggtcctcggccgcgaagcccccgtctatatgcag
caggcgatcatgcaatatcagcagatcgtgcagaatggcggctggccggaagttccggcg
tcgcagcagcgtctgcagatcggcgtctccgatccctccgttcaggcactgcgccagcga
ctgatggtatcgggcgacctgccgcgtgaagccggcatttccagcgccttcgactcctat
gtcgatggcgcgctgaagcgtttccaggcccgtcatggccttccggctgacggcgtcagc
ggcgaatataccaccaaggctctcaatgtgtccgcgcagattcgtctcgcgcagctgcag
accaacctcgtgcgcatccagtccatgtccggcgatctcggacagcgtcacctgatggtg
aacattccggccgccgccattgaagccgttgaaaacgaacgcgtcgtgctgcgcaacact
gccgttgtcggccgcgccagccgtccgacgcacgttatcaattcgaagatttacgaggtc
atcctcaacccctattggaccgcaccgcgctcgatcgtcgaaaaggacatcgtgccgctg
atgcagaaggatccgacctatctggagcggaacaatatccgccttatcgacggcaaggga
caggaagtctcgccgaccacggtcgactggttcgcgccgaaagcgccgaacctgatgttc
cgccaggaccccggcaagatcaacgccatgtcctcgacgaagatcaacttccacaatccg
aacaacgaatacatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgcttc
gagtcctccggttgcgtccgcgtgcagaacgtgcgcgacctgacgtcgtggctgctgcgc
gatacgcccggctggtcgcgccaagaaatggaacgcgtcattgcctcgcgcgtcaacacg
ccgatcaagctcgcacaggaagtgcccgtctacttcgtctacatcaccgcatggtcggcg
aaggacggcgtggttcagttccgcgacgatatctacggcaaggacggcaatgccgaactg
gcgctgaacacgacggcgggcatggaacagccggccggtgccgtggacgacgatctgctg
ccgcgcaactga
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