Agrobacterium pusense IRBG74: BN877_I1202
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Entry
BN877_I1202 CDS
T02867
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rir
Agrobacterium pusense IRBG74
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_I1202
Enzymes [BR:
rir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BN877_I1202
DNA repair and recombination proteins [BR:
rir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BN877_I1202
Prokaryotic type
BN877_I1202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HAD
DUF5848
Motif
Other DBs
NCBI-ProteinID:
CDI08112
UniProt:
U4PSL2
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All DBs
Position
complement(1176592..1178031)
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AA seq
479 aa
AA seq
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MQTKASPVIVWFRKDLRLSDNLALLAAADHKGPVIPVYIREKCCGALGRAQEWWLHHSLT
ALHAALKKTGSRLVLASGDAEEVLRRLVAETGADTVFWNRRYDPEGISTDKTLKRALRDE
GLTVRSFSGHLLHEPSKLQTKSGGPYRVYTPFWRALEGGEEPRAPVDAPDRLNAPRNWPR
SETLDEWQLLPKRPDWAREFSDIWTPGEDGAREKLSDFIDGALKGYEEGRDLPAKDATSR
LSPHLALGEISPATVWHATKGLSRHIASNDISRFRKEIVWREFCYHLLFHFPELDEKNWN
DSFDAFSWRDDDKSFTAWTRGMTGYPIVDAGMRQLWRHGTMHNRVRMIVASFLIKHLLID
WRKGETWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDGDGDYVRRF
VPELARLERKYIHKPFEAPKEVLTKAGITLGETYPNPIVDHGRARERALAAYARVKKKT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaaaagcctctcccgtcatcgtgtggttccgcaaggacctgcgcctttcggac
aacctcgctttgcttgcggcggccgaccacaaaggtcccgtcatccccgtctatatcagg
gaaaaatgttgcggcgcgctggggcgtgcgcaggaatggtggcttcaccactcgctcact
gcgcttcatgccgcgctcaagaaaacaggcagccgcctcgtgcttgccagcggcgacgcc
gaggaggttttgcgcaggctggtcgcggaaaccggcgcagacaccgtattctggaaccgc
cgctatgatcctgaaggtatttcgaccgacaagaccctaaaacgcgcgctccgggatgaa
ggcctgacggtacgaagcttttccggacatctgctgcatgagccatcgaagctgcagacg
aaatccggcggtccctaccgggtctatacaccgttctggcgcgctctggagggcggcgaa
gagccccgcgcgcctgtggatgcgccagacagactcaacgcgcccaggaactggccaaga
tcggaaacgctcgacgaatggcagctgctgcccaaaaggcctgactgggcaagggagttt
agcgatatctggacgcctggcgaagacggggcgcgggagaagctctccgatttcattgac
ggcgcactgaaaggttatgaagagggccgcgacctgccggcaaaggacgcgacttcccga
ctttcaccgcacctcgcattaggagaaatctcacccgccaccgtctggcatgcgacgaag
ggactttcccgccacatcgcctcaaacgatatcagccgttttcgcaaggaaatcgtctgg
cgggaattctgctatcacctcctgtttcattttcccgagctggacgaaaagaactggaac
gacagtttcgacgccttcagctggcgggacgatgacaaatccttcacggcctggacgcgc
ggcatgaccggctatccgatcgtggatgccgggatgcggcaactatggcgccacggcacg
atgcataaccgcgtccgcatgatcgtggcgtccttcctcatcaagcatctgctgatcgat
tggcgcaagggtgagacatggttccgcgatacgctcgtggacgccgatccggcctccaat
gccgccaactggcagtgggtggcgggttcgggagcggatgcctcgccatttttccgcatc
ttcaaccctatactgcaaggcgaaaaattcgatggggacggcgattatgtccgccgtttc
gtaccggagcttgcaaggctagaacgcaaatatattcacaaaccattcgaggccccgaaa
gaggtgctgaccaaagcgggcatcacgctcggggaaacctacccgaaccccattgtcgac
catggcagggcgcgggagagagcacttgctgcctatgccagagtgaagaagaagacataa
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