Agrobacterium pusense IRBG74: BN877_I2171
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Entry
BN877_I2171 CDS
T02867
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00470
D-Amino acid metabolism
rir00550
Peptidoglycan biosynthesis
rir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN877_I2171 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN877_I2171 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rir01011
]
BN877_I2171 (murD)
Enzymes [BR:
rir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BN877_I2171 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rir01011
]
Precursor biosynthesis
Amino acid ligase
BN877_I2171 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
TrkA_N
KARI_N
UDPG_MGDP_dh_N
NAD_binding_2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
CDI09062
UniProt:
U4PYZ4
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All DBs
Position
complement(2064186..2065595)
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AA seq
469 aa
AA seq
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MIPVTSFKGKKVALFGLGGSGLVTARALVAGGADVVAFDDNPDSVAKAEAEGIKTADLHT
IDWSSFSSFVLAPGVPLTHPKPHWSVDLAKASGVEIIGDIELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKSAGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTI
NPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSYSTLIADRVERAGVR
VERISKRNVVSEGLYAEGSRILRAHGGTSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAV
GVSEDEVCAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSFDRIYWIAGG
LPKAGGIASLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKD
ATPGNIVMLSPACASFDQYKNFEVRGDSFVAQVAALDGMTMLVHSGKGG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacgtcgttcaagggtaagaaagtcgctcttttcgggctcggcggttcg
ggtcttgtcacggcccgggcgctggtcgccggcggtgccgacgtcgtggctttcgatgat
aatcctgacagcgttgcaaaggccgaggccgagggcatcaagacggcggatctccacacg
attgactggtcgagtttctcctccttcgtgctggcaccgggcgtgccgctgacgcatccg
aagccgcactggtccgtcgatctggcgaaagcctccggcgtcgagatcatcggcgatatc
gagctctttgtccgagaacgtcgtgcccacgcgccggattgccccttcattgcgattacc
gggaccaacggcaagtcgaccaccacggcgctgatcgcacatattctgaaatcggctggt
cgcgatacgcagcttggcggcaatatcggtacggcggtactgagcctcgatccgcctaag
gcgcagcgcttctacgttgttgagtgctcgtcctaccagattgacttggcacccacgatc
aatccgactgccggcattcttctcaacctcactcccgatcatctcgaccggcatggcacg
atgcagcactatgccgacgtcaaggaacggcttgttgccggcagcggcacggcgattgtc
ggtgtcgacgacagctactcgacgctgattgccgatcgcgttgagcgtgccggcgtcagg
gttgagcgcatttccaagcgcaatgtcgtttccgaaggtctttatgccgagggcagccgc
atcctgcgggcgcatgggggaacttcgtcgttactggtcgatctcgatggtatccagacg
cttcgcggcagccacaatgcgcaaaatgcggcggcggcaattgcggcctgccttgcagtc
ggtgtttccgaggatgaagtttgtgcaggtctcaaatccttccccggcctcaagcatcgc
atgcagccggttggccgacgcggcaatgtcaccttcgtcaatgacagcaaggccaccaat
gccgatgcggcggcacctgcgctttcgagctttgaccgcatttactggattgccggcggt
ctgccgaaggccggcgggattgccagcctttcaccgcttttcccgcgcattgcaaaagcc
tatctgatcggcgaggcggcggcggaatttgcagcgacgctcggtgaagcggtgccctat
gaaatatccggcaccttggacaaggccgtgcagcatgcggcggcggatgcggaaaaagac
gcgacgcccggcaatatcgtgatgttgtccccggcttgcgcaagtttcgatcaatataag
aactttgaagtcagaggtgattcgtttgtcgcgcaggtcgcggcgctcgatggcatgacg
atgctcgttcactctggaaaagggggctga
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