Agrobacterium pusense IRBG74: BN877_I2248
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Entry
BN877_I2248 CDS
T02867
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00220
Arginine biosynthesis
rir00240
Pyrimidine metabolism
rir00250
Alanine, aspartate and glutamate metabolism
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BN877_I2248 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN877_I2248 (carB)
00220 Arginine biosynthesis
BN877_I2248 (carB)
Enzymes [BR:
rir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BN877_I2248 (carB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
Dala_Dala_lig_C
CoA_binding_2
YopH_N
Motif
Other DBs
NCBI-ProteinID:
CDI09139
UniProt:
U4PVH7
LinkDB
All DBs
Position
2148517..2152005
Genome browser
AA seq
1162 aa
AA seq
DB search
MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
EAIDMAEDRALFREAMARIGLETPRSMLANATEIKDADRKKHEAARAELKGKLSGPELDK
ALDDLENQWNLGETDRKQGYMAHAMAIAAQAIDHVGLPAIIRPSFTLGGTGGGIAYNRSE
FFDIVSGGLDASPTTEVLVEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPGYEEGEGSKNAI
RAAIGTPTPDRLRMVAQALRMGMSEEEVHENSKIDPWFIAQFKAIVDTEARIREHGLPQD
AENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYMYS
TYEIPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVVRP
SYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQTTA
LAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEKLD
PAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAFAK
SQLGAGVDLPRSGAVFVSVRDEDKEGVLPAIRILVESGFRVLATGGTQRFLAEKGINAEK
INKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
ALAIKALKAGNLEVKPLQSYFN
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagatatcaagtccatcctcatcatcggcgcgggaccgatcgttatc
ggtcaggcatgtgaattcgattactccggcacgcaggcctgtaaggcgctgaaggaagaa
ggttaccgggtcattctggtcaactccaacccggcgacgatcatgaccgatccgggtctc
gcggacgccacctacgtcgagccgatcacccctgaagtcgtggccaagatcattgcaaag
gagcgtcccgacgcgctgctgccgaccatgggcggccagaccgcgctcaacaccgcgctt
tctctcaagcgcatgggcgttctcgaccgctacaatgtcgaaatgatcggcgcgaagccc
gaagccatcgacatggctgaagaccgggccctcttccgcgaagccatggcccgcatcggc
cttgaaaccccgcgctcgatgctcgccaacgccacggaaatcaaggatgcagaccgcaag
aagcatgaagctgcgcgggcggaactgaagggcaagctctccggccccgaactcgacaag
gcgctggacgacctcgaaaaccagtggaacctcggcgaaaccgaccgcaagcagggttac
atggcccacgccatggccattgccgcccaggccatcgatcatgtcggcctgcccgccatc
atccgcccgtcgtttacgcttggcggcaccggtggcggcattgcctataaccgctcggaa
ttcttcgacatcgtctcgggcggcctcgacgcctcgccgacgacggaagttctggtcgaa
gaatcggttctgggctggaaggaatatgagatggaagtcgtccgcgacaccgcggacaat
tgcatcatcatctgctccatcgaaaacatcgatccgatgggcgtccacaccggtgactcc
atcactgtcgcgccagcgttgacgctgaccgacaaggaataccagatcatgcgcaacgcc
tcgattgcggtgctgcgtgagatcggcgtggaaaccggcggctccaacgtgcagttcgcc
gtcaacccgaaggacggccgcctcgtcgtcatcgaaatgaacccgcgcgtgtcgcgctcc
tctgcgctggcttccaaggcaaccggcttcccgatcgccaagatcgccgcgaagctcgcc
atcggctatactctggacgaactcgaaaacgacatcaccggcggcgccaccccggcatcg
ttcgaaccctcgattgactacgtcgtcaccaagatcccgcgttttgccttcgagaagttc
ccgggcgcgtcgccgatcctcaccaccgcgatgaagtcggtcggtgaagtcatggccatc
ggccgcacctttgcggaatccctgcagaaggcgctgcgcggtctcgaaaccggccttacc
ggtctcgatgaaatcgaaattcccggttacgaagagggcgaaggctccaagaacgcgatc
cgtgctgccatcggcacgccgacgccggatcgcctgcgcatggtcgcccaggcgctgcgc
atgggcatgagcgaagaggaagtccacgagaactcgaagatcgacccctggttcatcgcc
cagttcaaggccatcgtcgacacggaagcgcgcattcgcgagcatggcctgccgcaggat
gccgagaacctgcgcatgctgaaggccatgggcttctccgatgcccgcctcgccagcctg
acctccaagcgtccaaaggaagtggccgaactgcgcaacagcctgaacgtccgcccggtc
ttcaagcgcatcgacacctgcgccgccgaattcgcctcgccgaccgcctacatgtattcg
acctatgaaatacccttcgtcggcgccgcccgctctgaagcgcaggtctccgaccgcaag
aaggtcgtcatcctcggcggcggcccgaaccgtatcggccagggcatcgagttcgattat
tgctgctgccacgcagccttcgcgctgaaggatgccggctttgaagcgatcatgatcaac
tgcaacccggaaacggtgtccaccgactacgacacttccgaccgcctctatttcgagccg
ctgacggccgaagacgtgatcgagatcatgcgcgccgaacaggaaaagggtgaactcgtc
ggcgtcatcgtgcagttcggtggccagacgccgctgaagcttgcagaagcgctggaaaag
aacggtatcccgatcctcggcaccgcgcctgacatgatcgaccttgccgaagaccgcgac
cgcttccagaagctcttgatgaagctcgatctggcccaaccgaacaatggcatcgcctat
tcggtcgagcaggcccgccttgtcgcttctgaaatcggcttcccgctggtggttcgcccg
tcctacgttctgggtggccgcgccatgcagatcatccattcggaaggccagctccagacc
tacctgctcgacacggttccgggtctcgtacccgaggacatcaagcagcgttacccgaac
gacaagaccggccagatcaacaccctgctcggcaagaacccgcttctgttcgacagctac
ctgaccaacgccgtcgaagtggacgtcgacgcgctgtgcgatggcgaaaacgtcttcgta
tccggcatcatggagcacatcgaagaggctggcatccactcgggcgactcggcctgctcg
ctgccttcgcgttcgctcagcaaggaaacgctcgacgaactggagcgccagacgacggcg
cttgccaaggcgctcaaggtcggcggcctgatgaacgttcaatacgccatcaaggacggc
acgatctacgttctcgaagtcaacccgcgcgcttcgcgtaccgtgcctttcgtcgccaaa
acaatcggcgcgccgatcgccaagatcgccgcccgcgtcatggcgggcgagaagctcgat
ccggcgattgccgcttacggcgagaagcctgatccgcgtaacctcaagcacattgccgtt
aaggaagccgtcttccccttcgcgcgcttccccggcgtcgacattctgctcggaccggaa
atgcgctcgaccggtgaagtcatcggcctcgacactgatttcgcgctcgccttcgccaag
agccagctcggcgccggtgttgacctgccgcgctccggcgcggtcttcgtctcggtccgt
gacgaggacaaggaaggcgttctgcccgccatccgcattctcgtggaaagcggcttcaga
gtgctggcgaccggcggcacccagcgtttccttgccgaaaagggcatcaacgccgaaaag
atcaacaaggtgcaggaaggccgtccgcatatcgaggacgcaatccgcaaccgtcaggtc
cagctcgtcatcaacaccaccgacagcaacaaggcgatttccgactcgaagtcgctgcgc
cgcgcaacgttgatgcagaaggtgccctattacacgacgatggcaggtgccgaagcagcc
gccctcgccatcaaggcgctgaaggccggtaatctggaagtgaagccgctgcagagctac
ttcaactaa
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