Agrobacterium pusense IRBG74: BN877_I2655
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Entry
BN877_I2655 CDS
T02867
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC (5'-phosphoryl-5-aminoimidazole, 4-amino-5-hydroxymethyl-2-methylpyrimidine-P)
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00730
Thiamine metabolism
rir01100
Metabolic pathways
rir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BN877_I2655 (thiC)
Enzymes [BR:
rir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BN877_I2655 (thiC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CDI09540
UniProt:
U4Q706
LinkDB
All DBs
Position
complement(2545585..2547408)
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AA seq
607 aa
AA seq
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MNIAAKTIPLVVTTGPHAASTKIHKPGVLHPHIRVPMREIAVHPTAGEPPVTVYDSSGPY
TDPNHPVLIGKGLPRLRHDWIVARGDVEAYEGRHVKPEDNGFATGERLTPEFGVRHQPLK
ATAGKAVTQLAYARAGIVTPEMEFIAIRENLGREAAKEKLARDGESFGAHIPDYVTAEFV
RQEVASGRAIIPANINHPELEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWG
ADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLNWEVFRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFDEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWAKDCQVMIEGPGHVPMHKI
KENMDKQLKTCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKVGVITYKIAAHAADLAKGHPAAQVRDDALSRARFEFRWEDQFNLSLDPDTAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLEAMAARFKEGGELYMPL
PTPANAE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgctgccaagactataccgcttgttgttacaaccggcccgcatgccgcctcc
acgaaaatccataagccgggcgttttgcatccgcatatccgcgtaccgatgcgcgagatc
gcagtgcacccgacggcgggcgagccgccggtcacggtttatgattcctcaggtccctat
accgaccccaaccatccggtcctgatcggaaagggtctgccgcgtctgcgtcatgactgg
atcgtcgcgcgcggtgatgtcgaggcttacgagggacggcacgtcaaaccggaagataat
ggttttgccaccggtgagcgcctgacgcctgaatttggcgtgcgtcaccagcctctgaaa
gcgacggcgggcaaggcggtgacgcaacttgcctatgcgcgggcgggcattgtcacgccc
gaaatggaattcatcgccattcgcgaaaatctcgggcgcgaggcagcgaaggagaagctc
gcgcgtgacggtgagagtttcggcgcgcatattcctgattatgtcacggcggaatttgtg
cgtcaggaagtggcgtcgggccgcgccatcattccagccaatatcaaccaccctgaactt
gagccgatgatcatcggacgcaattttctcgtcaagatcaatgccaatatcggcaattcc
gccgtcacctcctcaatggcggaagaggttgagaagatggtctgggcgatccgctggggt
gcggatacggtcatggacctttcgaccggccgcaacatccacaatatccgcgaatggatc
atccgtaattcgccggttccgatcggtaccgtgccgctttatcaggcgctggagaaggtg
aacggcattgccgaagacctcaattgggaagtgttccgcgatacgctgatcgagcaggcg
gagcagggtgtggattatttcaccatccatgccggcgtgcggctgcattacatacccctc
accgtcaaccgcgtcaccggcatcgtctcacgcggcggctcgatcatggccaagtggtgt
cttcatcaccacaaggaaagtttcctctatgagcatttcgacgagatttgcgacatctgc
cgcgcttacgacgtctccttctcgctgggcgatggcctgcgtcccggctcgatcgctgac
gccaatgatgcggcgcagtttgcggagttagaaacgctgggcgagttgacacagatcgcc
tgggcaaaggattgccaggtgatgatcgaaggccccggccacgtgccgatgcacaagatc
aaggagaatatggacaagcagttgaagacctgcggcgaagcgcccttctatacgcttggg
ccgctgaccacggacattgcgcccggttacgaccacatcacgtccggcattggtgctgca
atgatcggctggttcgggaccgccatgctctgctacgttacgccgaaggaacacctcggt
ctgccggatcgtaatgacgtgaaggtgggtgtcattacctacaagatcgccgctcacgcc
gccgatctcgccaaggggcatccggccgcgcaggtgcgtgacgacgcgttgtcacgtgca
aggttcgagttccgctgggaggatcagttcaacctgtcgctcgatcccgatacggctcgg
tccttccatgacgagacgctgccgaaggaggcgcacaaggttgcgcatttctgctccatg
tgcggaccgaaattctgctcgatgcggatttcccacgatatccgcgccgaggcgcagaag
gaggggcttgaggccatggccgcgcgcttcaaggaaggcggtgagctttacatgccgctt
ccgacgcctgcgaatgccgaataa
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