Agrobacterium pusense IRBG74: BN877_I2717
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Entry
BN877_I2717 CDS
T02867
Symbol
lpdA2
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00010
Glycolysis / Gluconeogenesis
rir00020
Citrate cycle (TCA cycle)
rir00260
Glycine, serine and threonine metabolism
rir00280
Valine, leucine and isoleucine degradation
rir00310
Lysine degradation
rir00380
Tryptophan metabolism
rir00620
Pyruvate metabolism
rir00630
Glyoxylate and dicarboxylate metabolism
rir00640
Propanoate metabolism
rir00670
One carbon pool by folate
rir00785
Lipoic acid metabolism
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01120
Microbial metabolism in diverse environments
rir01200
Carbon metabolism
rir01210
2-Oxocarboxylic acid metabolism
rir01240
Biosynthesis of cofactors
Module
rir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rir_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rir_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BN877_I2717 (lpdA2)
00020 Citrate cycle (TCA cycle)
BN877_I2717 (lpdA2)
00620 Pyruvate metabolism
BN877_I2717 (lpdA2)
00630 Glyoxylate and dicarboxylate metabolism
BN877_I2717 (lpdA2)
00640 Propanoate metabolism
BN877_I2717 (lpdA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN877_I2717 (lpdA2)
00280 Valine, leucine and isoleucine degradation
BN877_I2717 (lpdA2)
00310 Lysine degradation
BN877_I2717 (lpdA2)
00380 Tryptophan metabolism
BN877_I2717 (lpdA2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BN877_I2717 (lpdA2)
00670 One carbon pool by folate
BN877_I2717 (lpdA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rir04147
]
BN877_I2717 (lpdA2)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BN877_I2717 (lpdA2)
Exosome [BR:
rir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BN877_I2717 (lpdA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_binding_2
FAD_oxidored
HI0933_like
Lys_Orn_oxgnase
GIDA
AlaDh_PNT_C
Thi4
FAD_binding_3
DAO
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
CDI09601
UniProt:
U4QAM4
LinkDB
All DBs
Position
complement(2621306..2622712)
Genome browser
AA seq
468 aa
AA seq
DB search
MAYDVVVIGTGPGGYVCAVKAAQLGLKVAVIEKRATYGGTCLNVGCIPSKALLHASETFA
HVAHGVDSLGIEVPAPKLNLEKMMAHKDGVVKANVDGVSFLFKKNKIDAFQGTGKVVSAG
KVSVTNDKGETQEIEAKNIVIATGSDVAGIPGVQVDIDESVIVSSTGAIALSKVPEKLIV
VGGGVIGLELGSVWSRLGAKVTVVEYLDNILGGMDAEVSKQAQRLLAKQGLDFKLGAKVT
AVEKTAAGAKVVFEPVKGGAAETLEANVVLISTGRKPYTEGLGLAEAGVVLDSRGRVEID
GHYKTNVDGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQRGHVNYDVIPAVVYTQPEVA
SVGKTEEELKAAGVAYKVGKFPFTANGRARAMQVTDGFVKILADKETDRVLGGHIVGFGA
GEMIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgatgtagttgtaatcggcaccggccccggcggttatgtttgcgcggtcaag
gcggcgcagctgggcctcaaggtcgctgtcatcgaaaagcgcgcgacctatggcggcaca
tgcctcaatgtcggctgcattccctccaaggcgctgctgcacgcgtccgaaaccttcgcg
catgttgcccatggtgtcgactcgctcggcatcgaagttccagcgcccaagctgaacctt
gaaaaaatgatggcgcacaaggacggcgtggtgaaggccaatgtcgatggcgtttccttc
ctgttcaagaagaacaagatcgatgctttccagggcaccggcaaggttgtgtcggccggc
aaggtttccgtcaccaacgacaagggcgagacacaggaaatcgaagcaaagaatatcgtc
atcgccacgggttctgacgttgccggcattccgggtgttcaggttgatatcgatgaaagc
gtcatcgtgtcctccaccggcgcaatcgctctctccaaggttccggaaaagctgatcgtt
gtcggtggcggcgtcatcggccttgaactcggttcggtctggtcgcgtctcggcgccaag
gttaccgtcgtcgaatatctcgacaacattctcggcggcatggatgccgaagtttccaag
caggcgcagcgtctgctcgccaagcagggcctcgatttcaagctcggcgcaaaggtaacg
gctgttgaaaaaaccgctgccggcgccaaggtcgtgttcgagccggtcaagggcggcgct
gccgaaacgctggaagcaaacgtcgtgctgatctccaccggccgcaagccctacaccgaa
ggtctcggccttgccgaagctggtgtcgtgcttgacagccgtggccgcgttgaaatcgac
ggccactacaagaccaatgtcgatggcatctatgcgatcggcgacgtggtgaagggcccg
atgctggcgcacaaggcggaagacgagggtgttgcgcttgcggaaatccttgccggccag
cgcggtcacgtgaattacgacgtcattccggcagtcgtttacacgcagccggaagtggct
tccgtcggcaagaccgaagaggaactcaaggccgccggcgtcgcttacaaggttggcaag
ttccccttcaccgccaatggccgcgcccgcgccatgcaggtgacggatggtttcgtgaag
atccttgccgacaaggaaaccgaccgggttctcggcggtcacattgtcggcttcggcgct
ggcgaaatgatccacgagatcaccgtactgatggagtttggcggttcctcggaagatctc
ggccgtacctgccatgcgcacccgaccatgtcggaagccgtgaaggaagcggcattggca
acgttcttcaagccgatccacatgtga
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