Agrobacterium pusense IRBG74: BN877_I2728
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Entry
BN877_I2728 CDS
T02867
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00020
Citrate cycle (TCA cycle)
rir00190
Oxidative phosphorylation
rir00650
Butanoate metabolism
rir00720
Other carbon fixation pathways
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01120
Microbial metabolism in diverse environments
rir01200
Carbon metabolism
Module
rir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rir_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BN877_I2728 (sdhA)
00650 Butanoate metabolism
BN877_I2728 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
BN877_I2728 (sdhA)
00720 Other carbon fixation pathways
BN877_I2728 (sdhA)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BN877_I2728 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
CDI09612
UniProt:
A0A1L9CPT9
LinkDB
All DBs
Position
complement(2634456..2636297)
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AA seq
613 aa
AA seq
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MASISSPSQNGKAYTYVDHSYDVIVVGAGGAGLRATLGMAEQGFKTACITKVFPTRSHTV
AAQGGIAASLTNMTPDCWQWHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFS
RNEEGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFA
LDLIMAPDGRCTGVVAWNLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMI
ARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTMEIREGRGVGKNKDHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADANNPERIAPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAAQVINRDEAIPALDTAACDRIMERFDSLRYANGSTPTAVLRDKMQRAM
QDDAAVFRTQESLESGCRRLSAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTV
YGAEARKESRGSHAREDFVDGPFGGRDDVNWRKHTLAWVSPEGDVKLDYRPVHTDLIADG
IDPKKIEPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatcagttcaccttcccagaatggcaaggcctacacctatgtcgatcactcc
tatgacgtgatcgtggtgggcgccggcggcgccggtctgcgcgctacactcggcatggcc
gaacagggtttcaagaccgcctgcatcaccaaggttttcccgacgcgctcccacaccgtc
gcagcgcagggcggcatcgccgcatcgctcaccaacatgacgccggactgttggcagtgg
cacctttacgacaccgtaaagggctccgactggctgggcgatgtcgacgcgatgcaatat
ctcgccatggaagcgccgaaggcggtctatgagctggagcattacggcgtgcctttctcg
cgtaacgaagaaggcaagatctaccagcgccccttcggcggccacatgcagaattacggc
gaaggcccaccggtgcagcgcacctgtgccgccgccgaccgtaccggtcacgccattctg
cacacgctttatggccagtcgctgcgcaacaatgcggaattcttcatcgaatatttcgcg
ctcgacctcatcatggcgccggatggccgctgcactggcgtcgttgcctggaacctcgat
gacggcacgatccaccgcttcgctgccaagatggtcgttctggcgaccggcggttacggc
cgcgcctatttctcggcgacgtctgcccacacctgcaccggcgacggcggcggcatgatc
gcccgtgcgggcctgccgcttcaggacatggaattcgtgcagttccacccgaccggtatt
tatggcgcgggctgcctcatcaccgaaggcgcgcgcggcgaaggcggctatctcgtcaac
tccgaaggcgaacgcttcatggagcgttatgcaccttcggcgaaggaccttgcctcgcgt
gacgttgtctcgcgctgcatgacgatggaaatccgtgaaggccgcggcgtcggcaagaac
aaggaccacatcttcctgcatctcgatcatctcgatcctgcgatcctgcatgagcgcctt
ccgggtatttccgaaagcgccaagatcttcgccggcgttgacgtgacccgggagccgatc
ccggtcctgccgacggttcactacaacatgggcggcattccgaccaactattggggtgaa
gtgctgaatgccgatgccaacaacccggaacgcatcgcgcccggcctgatggcggtcggc
gaagccggttgcgcctcggttcacggcgccaaccgtcttggctccaactcgctgatcgac
ctcgtggtcttcggtcgtgccgccgccatccgcgccgctcaggtcattaatcgtgacgag
gcgattcccgctctcgatacggctgcctgcgacaggatcatggaacgctttgacagcctg
cgttatgccaacggctcgacgccgacggcggtgctgcgcgacaagatgcagcgcgccatg
caggacgatgcggccgtgttccgcacacaggaatcgctcgaaagcggctgccgccgtctc
tcggcgatctggaaggaactgcccgacgtcaaggtcaccgaccgttcgatggtctggaat
tccgacctggtcgaaacgctcgagttgcataacctcatggccaatgccatcaccacggtc
tacggcgcggaagcgcgcaaggaaagccgtggttcgcatgcccgcgaggatttcgtcgac
ggtccgttcggtggtcgcgacgacgtgaactggcgcaagcatacgcttgcctgggtcagc
cccgaaggcgacgtgaagctcgactatcgcccggttcacaccgacctgatcgccgacggc
atcgatccgaaaaagatcgagccgaaggcgcgtgtctactga
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