Agrobacterium pusense IRBG74: BN877_II0025
Help
Entry
BN877_II0025 CDS
T02867
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03030
DNA replication
rir03430
Mismatch repair
rir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN877_II0025
03430 Mismatch repair
BN877_II0025
03440 Homologous recombination
BN877_II0025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rir03032
]
BN877_II0025
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_II0025
Enzymes [BR:
rir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN877_II0025
DNA replication proteins [BR:
rir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN877_II0025
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN877_II0025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
DUF7432
Motif
Other DBs
NCBI-ProteinID:
CDI09827
UniProt:
U4QBC3
LinkDB
All DBs
Position
linear:15635..16504
Genome browser
AA seq
289 aa
AA seq
DB search
MNDAEEMARRLEALPGYRVLRALDVKAGVDRLRPRAAGERIAVVADCETTGLDVTADRLV
EIATQRFLFDESGRIIEIEHVSSWLEDPDRPMPERLALMTGLSNSELAGKKFDEAAICQI
LGGADVVIAHNAAFDRPFLDRRFPILNQLAWACSLTQIDWLVHGFDGRSLGHLLSQAGYF
FQGHRASNDVQALTTLLRVVDKEGCTILSHLLRSFEKDVIRINAIGAPFESKDQLKAAGY
RWDVGRRFWWREVDEDALLSETAWLAENIYRGGGQPSIQTISARDRFKR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccgaagagatggctcgccgccttgaagccctgcccgggtaccgtgttttg
cgagccttggacgtgaaggctggcgttgataggcttcggccccgtgcagcaggcgaacgt
attgctgtagtggctgattgcgaaacgactggccttgatgtcactgccgacaggctcgtc
gagattgccacgcagcgttttctcttcgatgagagcggtcgtatcattgagatagagcat
gtgagctcttggcttgaagacccagatcggccaatgcctgaaaggctggcgttgatgaca
gggctttccaactccgagctcgctgggaaaaaattcgacgaagccgcaatttgccaaatc
ctcggtggtgcggatgttgttattgcccacaacgcagcgtttgatcggccgtttctcgat
cgacgattcccaattctaaaccaattagcttgggcgtgtagcttgactcagattgattgg
ctcgttcacggttttgatggccggtcactcggacatctgttgagccaagccggatatttt
tttcaaggtcaccgggcttctaacgatgtgcaggccttaacgactctccttcgggtggtc
gataaagagggatgcactatactctcccatttgcttcgttcttttgagaaagatgttatc
cgtataaacgcaatcggtgcgccatttgaatcgaaagatcaactaaaagctgccggatat
cgatgggatgttggtcggcgtttttggtggcgggaagtcgatgaagacgcactattgagt
gagacggcttggctcgccgaaaatatttatcgcggtggagggcaaccaagtattcaaact
atcagtgcacgcgaccgtttcaaacgctaa
DBGET
integrated database retrieval system
