Agrobacterium pusense IRBG74: BN877_II0055
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Entry
BN877_II0055 CDS
T02867
Name
(GenBank) putative ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN877_II0055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rir02000
]
BN877_II0055
Transporters [BR:
rir02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN877_II0055
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
CDI09856
UniProt:
A0A1L9CN30
LinkDB
All DBs
Position
linear:complement(46765..48054)
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AA seq
429 aa
AA seq
DB search
MTDTTSSKKGLSRRGLLKAGAAATGAAIGSGLITGFPTIWAQNPITIRQFGTGVSNLNAI
AEKCKADLGITLEMTATDSDAAAQRAVTQPNSYDIADIEYWILKKVYPAGVIQPMEIKKL
KYYDKIVPLFKNGKLKPDSVVAQGTAPHTVGYVEKPGDKTFAKGETDYFTMVPTIYNADT
LGIRPDLVGRDITSWADIMDPKFKGKTSILNIPSIGIMDAAMIMEAMGNIKYADKGNMTK
AEIDKTIDFLIKAKKDGQFRAFWKSFDESVNLMASGEVIIQSMWSPAVAAVRSKGIACKY
QPLKEGYRSWGGGLGLAKHLSGAKLDAAYEYINWYTSGWVGAYLNRQGYYSAAMETAKEH
MTADEWGYWVEGKAAQGDIIAPDGKVMEKAGAVRDGGSFEERMGKVACWNSVMDEDRYMV
RRWNEFIAA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccaccagcagcaagaagggcctgtcccgccgcggcctcctgaaagcgggc
gcggctgccacgggtgcggcgatcggctccggcctcataaccggcttcccgaccatctgg
gcgcagaaccccatcaccatccgccagttcggcaccggcgtctccaacctcaacgccatt
gccgaaaagtgcaaggcggacctcggcatcacgcttgagatgacggcgacggattccgac
gccgctgcccagcgcgccgtcacccagccgaactcctacgatatcgccgatatcgaatac
tggatcctgaagaaggtctatccggccggcgtcatccagccgatggaaatcaagaagctc
aaatattacgacaagatcgtgccgctgttcaaaaacggcaagctgaagcctgacagcgtg
gtcgcgcagggcactgcgccgcacactgtcggttacgtcgagaagcccggcgacaagaca
tttgccaagggtgagaccgattatttcaccatggttccgaccatctacaatgccgatacg
ctcggcatccgccccgatctcgtcggccgcgatatcaccagctgggccgatatcatggac
cccaagttcaagggcaagacctccatcctcaacatcccgtccatcggcatcatggacgcg
gcgatgatcatggaagccatgggcaacatcaaatatgccgacaagggcaacatgacgaag
gcggaaatcgacaagaccatcgacttcctcatcaaggccaagaaggacggccagttccgc
gccttctggaagagcttcgacgaaagcgtcaacctcatggcctcgggcgaagtcatcatc
cagtccatgtggtcaccggccgttgccgcggtccggtcgaagggcatcgcctgcaaatat
cagccgctgaaggaaggctatcgctcctggggcggcggtctcggtctcgccaagcatctg
tccggtgcgaagctcgatgcagcctatgaatatatcaactggtacacctcgggctgggtc
ggcgcctacctcaaccgtcagggttattactccgccgccatggaaaccgcgaaggagcac
atgaccgccgacgagtggggttactgggtcgagggcaaggcggctcagggcgatatcatc
gcgccagacggcaaggtcatggaaaaggccggtgccgtgcgcgatggcggttccttcgag
gagcgcatgggcaaggtggcgtgctggaactcggtcatggacgaagaccgctacatggtt
cgccgctggaacgagttcatcgcggcgtga
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