Agrobacterium pusense IRBG74: BN877_II0063
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Entry
BN877_II0063 CDS
T02867
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03030
DNA replication
rir03430
Mismatch repair
rir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN877_II0063
03430 Mismatch repair
BN877_II0063
03440 Homologous recombination
BN877_II0063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rir03032
]
BN877_II0063
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_II0063
Enzymes [BR:
rir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN877_II0063
DNA replication proteins [BR:
rir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN877_II0063
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN877_II0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CDI09864
UniProt:
U4PXX2
LinkDB
All DBs
Position
linear:complement(53256..54239)
Genome browser
AA seq
327 aa
AA seq
DB search
MTSQLDFFASAAARLPETERGRKMSGRGAVQRVAMDDEGLAGYLESTGNYRVLRKLMPRQ
VVERPRPEFSRRGVILDTETTGLNHRTDEIIEIGVIAFTFDDQGVIGDVTGIYGGLRQPN
VAIPSEITRLTGITDDMVAGQAIDMERLASLVGDADLIIAHNAGFDRPFCEGFSPIFNEK
AWACSVSEIDWRVRGFEGNKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQNRPGQEGMTP
FMELHAASRRSRVRIYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWAELPEEMLAEELH
FLRTEIYRWDADPTVKYLTAFDRFKAG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagttggactttttcgcttccgcggccgcgcggcttcccgagaccgaacgg
gggcgaaaaatgtcgggacgcggagcggtgcagagggtcgcgatggatgacgaggggctg
gcgggctatctcgaatccaccggcaattaccgcgttctgcgcaagctcatgccgcgtcag
gtcgtggaacggccaaggccggaattttcccgccggggtgtgatcctcgacaccgaaacc
acgggtctgaaccaccggacggacgaaataatcgagatcggcgtcatcgccttcacgttc
gacgatcagggcgtcattggcgacgtcaccggcatttacggcggactgcggcagcccaac
gtcgccataccgtcggagatcacccggctgacagggatcaccgatgacatggttgcgggg
caggcgatcgacatggagcggctggcttctctcgtcggcgatgccgatctgatcattgcc
cacaatgccggcttcgaccgtcccttctgtgaaggcttctcgcccatattcaatgagaag
gcctgggcctgctccgtttccgaaatcgactggcgggtgcgtggatttgagggcaacaag
ctgggttatctgatcggtcagtccggttatttccatgatggccatcgcgcggttgatgat
tgcttcgcgctgctggaggtgctcgagcagaaccggccgggccaggaaggcatgacgccc
ttcatggagcttcacgcggctagccgcagatcgcgcgtccggatctacgcggagaacagc
cccttcgatatgaaggatcacctgaaaaagcggggttatcgctggtcggacggttcggac
ggccggccgaaatcctggtgggcggagctgccggaagagatgctggcggaggagctgcat
tttctgcgcaccgaaatctatcgctgggacgccgaccctacggtcaaatatctcacggct
ttcgaccggttcaaggccgggtag
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